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Tmad_KSU_1.1

Organism name:
Tribolium madens (black flour beetle)
Infraspecific name:
Breed: KSU strain
Isolate:
multiple individuals
Sex:
pooled male and female
BioSample:
SAMN16398860
BioProject:
PRJNA668153
Submitter:
Kansas State University
Date:
2020/11/10
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_015345945.1 (latest)
RefSeq assembly accession:
GCF_015345945.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
JADDYM01
Assembly method:
AllPaths v. G-40028; AllPaths v. G-42337; HiRise v. Devetail 2019
Expected final version:
yes
Genome coverage:
22.0x
Sequencing technology:
Illumina GAII

IDs: 8471851 [UID] 23040378 [GenBank] 29559508 [RefSeq]

See Genome Information for Tribolium madens

History (Show revision history)

Comment

Global statistics

Total sequence length149,377,654
Total ungapped length143,773,742
Gaps between scaffolds0
Number of scaffolds112
Scaffold N5015,175,020
Scaffold L505
Number of contigs5,889
Contig N5076,672
Contig L50460
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)112

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced149,377,654112143,773,74215,175,0205,7770
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