Full Report

Send to:

Choose Destination

File
Clipboard
Collections

Download Assembly

Source database (GenBank or RefSeq) File type

IMG-taxon 2597490358 annotated assembly

Organism name:: Paracoccus denitrificans (a-proteobacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: DSM 415
BioSample:: SAMN04244569
BioProject:: PRJEB17228
Submitter:: DOE - JOINT GENOME INSTITUTE
Date:: 2016/11/02
Assembly type:: na
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_900115985.1 (latest)
RefSeq assembly accession:: GCF_900115985.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: FOYK01
Genome coverage:: 218x

IDs: 884611 [UID] 3708968 [GenBank] 3914058 [RefSeq]

See Genome Information for Paracoccus denitrificans

Pathogen Detection Resources

There are 17 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_900115985.1	=	GCF_900115985.1	IMG-taxon 2597490358 annotated assembly	Scaffold	Latest GenBank, Latest RefSeq

Comment

Global statistics

Total sequence length	5,192,961
Total ungapped length	5,192,129
Gaps between scaffolds	0
Number of scaffolds	90
Scaffold N50	166,361
Scaffold L50	12
Number of contigs	91
Contig N50	166,361
Contig L50	12
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	90

	ANI	Query coverage	Subject coverage
Declared type	99.98	99.44	98.48
Best-match type	99.98	99.44	98.48

Assembly

Genome Assembly

Result Filters

Organism group

Status

Assembly level

RefSeq category

Exclude

Annotation status

Taxonomy check status

Relation to type material

Assembly type

Sequence release date

Custom date range

Contig N50

Custom range

Scaffold N50

Custom range

Additional filters

Download Assembly

IMG-taxon 2597490358 annotated assembly

See Genome Information for Paracoccus denitrificans

Pathogen Detection Resources

There are 17 assemblies for this organism

History (Show revision history)

Comment

Global statistics

Supplemental Content

Access the data

Assembly Information

Related Information

Recent activity

Global assembly definition

Assembly statistics

Assembly QA

Taxonomy Check Data

Declared organism

Best-matching type-strain assembly for declared species

Best-matching type-strain assembly

Average Nucleotide Identity (ANI) data

ANI result