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fGouWil2.1

Organism name:
Gouania willdenowi (blunt-snouted clingfish)
BioSample:
SAMEA104026382
BioProject:
PRJEB30359
Submitter:
SC
Date:
2019/02/06
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_900634775.1 (replaced)
RefSeq assembly accession:
GCF_900634775.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
CAAAFV01
Genome coverage:
58x
Linked assembly:
GCA_900650505.1 (alternate pseudohaplotype of diploid)

IDs: 2275231 [UID] 8516538 [GenBank] 8745588 [RefSeq]

See Genome Information for Gouania willdenowi

Pathogen Detection Resources

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length937,150,793
Total ungapped length922,797,289
Gaps between scaffolds0
Number of scaffolds441
Scaffold N5038,978,045
Scaffold L5011
Number of contigs1,594
Contig N501,838,341
Contig L50132
Total number of chromosomes and plasmids23
Number of component sequences (WGS or clone)441

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
Assembly Unit: Primary Assembly (GCF_900634774.1)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1LR131998.1=NC_041044.10
Chromosome 2LR132002.1=NC_041045.10
Chromosome 3LR132003.1=NC_041046.10
Chromosome 4LR131994.1=NC_041047.10
Chromosome 5LR131993.1=NC_041048.10
Chromosome 6LR132000.1=NC_041049.10
Chromosome 7LR131985.1=NC_041050.10
Chromosome 8LR131991.1=NC_041051.10
Chromosome 9LR131997.1=NC_041052.10
Chromosome 10LR131995.1=NC_041053.10
Chromosome 11LR131984.1=NC_041054.10
Chromosome 12LR132004.1=NC_041055.10
Chromosome 13LR131999.1=NC_041056.10
Chromosome 14LR131983.1=NC_041057.10
Chromosome 15LR131987.1=NC_041058.10
Chromosome 16LR131992.1=NC_041059.10
Chromosome 17LR131986.1=NC_041060.10
Chromosome 18LR131982.1=NC_041061.10
Chromosome 19LR131996.1=NC_041062.10
Chromosome 20LR131990.1=NC_041063.10
Chromosome 21LR132001.1=NC_041064.10
Chromosome 22LR131988.1=NC_041065.10
Chromosome 24LR131989.1=NC_041066.11
unplacedn/an/an/a417

Assembly statistics

MoleculeSequence RoleTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
AllAssembled molecule937,150,793441922,797,28938,978,0451,1530
Chromosome 1Assembled molecule45,933,286145,831,56245,933,286330
Chromosome 2Assembled molecule13,848,833113,846,64013,848,833180
Chromosome 3Assembled molecule46,057,556145,755,35346,057,556460
Chromosome 4Assembled molecule43,801,156142,627,13443,801,156460
Chromosome 5Assembled molecule42,802,790142,656,07542,802,790300
Chromosome 6Assembled molecule72,451,976172,447,67572,451,976360
Chromosome 7Assembled molecule40,544,756140,383,36740,544,756320
Chromosome 8Assembled molecule34,658,348134,392,52534,658,348200
Chromosome 9Assembled molecule43,149,712142,989,18843,149,712330
Chromosome 10Assembled molecule42,970,088142,391,63842,970,088470
Chromosome 11Assembled molecule32,583,565132,443,18332,583,565200
Chromosome 12Assembled molecule33,478,699133,473,53533,478,699460
Chromosome 13Assembled molecule44,521,366141,659,81544,521,366300
Chromosome 14Assembled molecule36,801,689135,433,52636,801,689470
Chromosome 15Assembled molecule37,027,010136,157,98237,027,010340
Chromosome 16Assembled molecule40,234,402139,349,15740,234,402290
Chromosome 17Assembled molecule37,169,619136,457,58037,169,619500
Chromosome 18Assembled molecule28,478,336128,180,84728,478,336390
Chromosome 19Assembled molecule26,982,661126,457,98826,982,661170
Chromosome 20Assembled molecule28,787,763128,615,55828,787,763320
Chromosome 21Assembled molecule38,978,045138,973,00938,978,045460
Chromosome 22Assembled molecule34,676,616134,391,79634,676,616370
Chromosome 24AllAssembled moleculeUnlocalized scaffolds30,684,06325,951,2734,732,79021130,106,75325,374,7724,731,98125,951,27325,951,2734,732,79041329000
unplacedAssembled molecule60,528,45841757,775,403465,3153440