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fBetSpl5.2

Organism name:
Betta splendens (Siamese fighting fish)
BioSample:
SAMEA104381735
BioProject:
PRJEB30365
Submitter:
SC
Date:
2019/03/20
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_900634795.2 (replaced)
RefSeq assembly accession:
GCF_900634795.2 (replaced)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT
  • Data displayed for RefSeq version
WGS Project:
CAAAFW02
Genome coverage:
48x

IDs: 2799031 [UID] 9846398 [GenBank] 9964538 [RefSeq]

See Genome Information for Betta splendens

Pathogen Detection Resources

There are 5 assemblies for this organism

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History (Show revision history)

Comment

Global statistics

Total sequence length441,388,503
Total ungapped length441,359,234
Gaps between scaffolds0
Number of scaffolds70
Scaffold N5020,129,463
Scaffold L509
Number of contigs398
Contig N502,497,747
Contig L5048
Total number of chromosomes and plasmids22
Number of component sequences (WGS or clone)70

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Assembly Information

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
Assembly Unit: Primary Assembly (GCF_900634794.2)
Molecule nameGenBank sequenceRefSeq sequenceUnlocalized
sequences count
Chromosome 1LR132024.2=NC_040881.10
Chromosome 2LR132025.2=NC_040882.10
Chromosome 3LR132008.2=NC_040883.10
Chromosome 4LR132005.2=NC_040884.10
Chromosome 5LR132018.2=NC_040885.10
Chromosome 6LR132013.2=NC_040886.10
Chromosome 7LR132010.2=NC_040887.10
Chromosome 8LR132020.2=NC_040888.10
Chromosome 9LR132023.2=NC_040889.10
Chromosome 10LR132007.2=NC_040890.10
Chromosome 11LR132019.2=NC_040891.10
Chromosome 12LR132017.2=NC_040892.10
Chromosome 13LR132006.2=NC_040893.10
Chromosome 14LR132016.2=NC_040894.10
Chromosome 15LR132021.2=NC_040895.10
Chromosome 16LR132009.2=NC_040896.10
Chromosome 17LR132015.2=NC_040897.10
Chromosome 19LR132011.2=NC_040898.10
Chromosome 21LR132022.2=NC_040899.10
Chromosome 22LR132012.2=NC_040900.10
Chromosome 24LR132014.2=NC_040901.10
unplacedn/an/an/a48

Assembly statistics

MoleculeTotal
Length		Scaffold
Count		Ungapped
Length		Scaffold
N50		Spanned
Gaps		Unspanned
Gaps
All441,371,52369441,342,25420,129,4633280
Chromosome 122,294,991122,293,76622,294,991150
Chromosome 229,498,272129,495,74729,498,272290
Chromosome 320,129,463120,128,46320,129,463120
Chromosome 434,863,213134,860,86334,863,213270
Chromosome 521,146,536121,144,38621,146,536250
Chromosome 619,902,465119,901,51619,902,46580
Chromosome 718,668,249118,666,90418,668,249140
Chromosome 816,455,974116,455,14916,455,974110
Chromosome 932,137,567132,135,69232,137,567210
Chromosome 1021,190,454121,189,67921,190,45480
Chromosome 1116,885,281116,884,32616,885,281130
Chromosome 1214,654,323114,654,04814,654,32340
Chromosome 1321,545,776121,543,92621,545,776160
Chromosome 1417,358,772117,357,69717,358,772110
Chromosome 1519,576,149119,574,57419,576,149190
Chromosome 1621,788,636121,787,17621,788,636130
Chromosome 1718,063,741118,061,59118,063,741250
Chromosome 1918,759,158118,757,53318,759,158160
Chromosome 2118,688,203118,687,22818,688,203130
Chromosome 2216,788,622116,787,61216,788,622110
Chromosome 2414,918,949114,917,87414,918,949110
unplaced6,056,729486,056,504212,49960
MoleculeTotal
Length
Mitochondrion MT16,980