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Source database (GenBank or RefSeq) File type

35860_G01

Organism name:: Haemophilus influenzae (g-proteobacteria)
Taxonomy check:: Inconclusive
Infraspecific name:: Strain: NCTC8468
BioSample:: SAMEA3222080
BioProject:: PRJEB6403
Submitter:: SC
Date:: 2019/05/11
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
GenBank assembly accession:: GCA_901472485.1 (latest)
RefSeq assembly accession:: GCF_901472485.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes
Genome coverage:: 100x

IDs: 3157001 [UID] 10609388 [GenBank] 10711028 [RefSeq]

See Genome Information for Haemophilus influenzae

Pathogen Detection Resources

There are 1324 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_901472485.1	=	GCF_901472485.1	35860_G01	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::02/13/2024 03:12:48
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::1,842
CDSs (total)::1,762
Genes (coding)::1,697
CDSs (with protein)::1,697
Genes (RNA)::80
rRNAs::7, 6, 6 (5S, 16S, 23S)
complete rRNAs::7, 6, 6 (5S, 16S, 23S)
tRNAs::57
ncRNAs::4
Pseudo Genes (total)::65
CDSs (without protein)::65
Pseudo Genes (ambiguous residues)::0 of 65
Pseudo Genes (frameshifted)::38 of 65
Pseudo Genes (incomplete)::25 of 65
Pseudo Genes (internal stop)::15 of 65
Pseudo Genes (multiple problems)::12 of 65
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	1,876,886
Total ungapped length	1,876,886
Total number of chromosomes and plasmids	1

	ANI	Query coverage	Subject coverage
Declared type	95.12	87.61	86.97
Best-match type	95.12	87.61	86.97

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35860_G01

See Genome Information for Haemophilus influenzae

Pathogen Detection Resources

There are 1324 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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