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IDs: 12376281 [UID] 32413218 [GenBank] 33782148 [RefSeq]
The assembly jaNemVect1.1 is based on 53x PacBio data and Arima2 Hi-C data generated by the Darwin Tree of Life Project (https://www.darwintreeoflife.org/). The assembly process included the following sequence of steps: initial PacBio assembly generation with Hifiasm, retained haplotig separation ... with purge_dups, and Hi-C based scaffolding with YaHS. The mitochondrial genome was assembled using MitoHifi. Finally, the assembly was analysed and manually improved using rapid curation. Chromosome-scale scaffolds confirmed by the Hi-C data have been named in order of size. Order and orientation of scaffolds uncertain on chromosome 8 11.85-12.24mb, chromosome 12 7.39-7.99mb more
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