Format
Items per page
Sort by

Send to:

Choose Destination

Download Assemblies



Links from Genome

Items: 1 to 20 of 23

  • Filters activated: Latest, Exclude anomalous. Clear all
1.

GRCm39

Genome Reference Consortium Mouse Build 39

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: C57BL/6J
Submitter:
Genome Reference Consortium
Date:
2020/06/24
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
reference genome
Synonyms:
mm39
GenBank assembly accession:
GCA_000001635.9 (latest)
RefSeq assembly accession:
GCF_000001635.27 (latest)
IDs:
7358741 [UID] 20371618 [GenBank] 20412818 [RefSeq]
2.

AKR_J_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: AKR/J
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624295.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731261 [UID] 3209038 [GenBank]
3.

A_J_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: A/J
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624215.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731251 [UID] 3209028 [GenBank]
4.

NZO_HlLtJ_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: NZO/HiLtJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624745.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731321 [UID] 3209098 [GenBank]
5.

BALB_cJ_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: BALB/cJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/05/09
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001632525.1 (latest)
RefSeq assembly accession:
n/a
IDs:
738451 [UID] 3227818 [GenBank]
6.

FVB_NJ_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: FVB/NJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624535.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731301 [UID] 3209078 [GenBank]
7.

C3H_HeJ_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: C3H/HeJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/05/09
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001632575.1 (latest)
RefSeq assembly accession:
n/a
IDs:
738461 [UID] 3227868 [GenBank]
8.

129S1_SvImJ_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: 129S1/SvImJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624185.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731241 [UID] 3209018 [GenBank]
9.

DBA_2J_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: DBA/2J
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624505.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731291 [UID] 3209068 [GenBank]
10.

CBA_J_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: CBA/J
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624475.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731281 [UID] 3209058 [GenBank]
11.

C57BL_6NJ_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: C57BL/6NJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/05/09
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001632555.1 (latest)
RefSeq assembly accession:
n/a
IDs:
738481 [UID] 3227888 [GenBank]
12.

LP_J_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: LP/J
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/05/09
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001632615.1 (latest)
RefSeq assembly accession:
n/a
IDs:
738491 [UID] 3227898 [GenBank]
13.

NOD_ShiLtJ_v1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: NOD/ShiLtJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624675.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731311 [UID] 3209088 [GenBank]
14.

PWK_PhJ_v1

Organism:
Mus musculus musculus (eastern European house mouse)
Infraspecific name:
Strain: PWK/PhJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624775.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731331 [UID] 3209108 [GenBank]
15.

WSB_EiJ_v1

Organism:
Mus musculus domesticus (western European house mouse)
Infraspecific name:
Strain: WSB/EiJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624835.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731351 [UID] 3209128 [GenBank]
16.

CAST_EiJ_v1

Organism:
Mus musculus castaneus (southeastern Asian house mouse)
Infraspecific name:
Strain: CAST/EiJ
Sex:
female
Submitter:
Wellcome Trust Sanger Institute
Date:
2016/04/26
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_001624445.1 (latest)
RefSeq assembly accession:
n/a
IDs:
731271 [UID] 3209048 [GenBank]
17.

ASM377452v2

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: C57BL/6J
Sex:
female
Submitter:
Jackson Laboratory
Date:
2018/11/19
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003774525.2 (latest)
RefSeq assembly accession:
n/a
IDs:
2109541 [UID] 7878208 [GenBank]
18.

ASM18119v1

WGS contigs used to build the MGSCv3 assembly

Organism:
Mus musculus (house mouse)
Submitter:
Mouse Genome Sequencing Consortium
Date:
2002/05/15
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_000181195.1 (latest)
RefSeq assembly accession:
n/a
IDs:
228898 [UID] 228898 [GenBank]
19.

MmusALLPATHS2

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: C57BL/6J
Sex:
female
Submitter:
Broad Institute
Date:
2012/08/29
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000185105.2 (latest)
RefSeq assembly accession:
n/a
IDs:
419498 [UID] 419498 [GenBank]
20.

MmusSOAP1

Organism:
Mus musculus (house mouse)
Infraspecific name:
Strain: C57BL/6J
Sex:
female
Submitter:
Broad Institute
Date:
2011/01/06
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_000185125.1 (latest)
RefSeq assembly accession:
n/a
IDs:
239318 [UID] 239318 [GenBank]
Format
Items per page
Sort by

Send to:

Choose Destination

Supplemental Content

NCBI Datasets

Download a genome dataset including genome, transcript and protein sequence, annotation and a data report. Learn more

Your selected data and a detailed data report will be downloaded as a ZIP file.

Select up to 200 genome assemblies from the search results using the checkboxes next to the assembly names.

Find related data

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...
Support Center