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Source database (GenBank or RefSeq) File type

UCRNP2V3

Organism name:: Neofusicoccum parvum UCRNP2 (ascomycete fungi)
Isolate:: UCRNP2
BioSample:: SAMN01906718
BioProject:: PRJNA187491
Submitter:: UC Davis
Date:: 2013/05/03
Assembly level:: Scaffold
Genome representation:: full
GenBank assembly accession:: GCA_000385595.1 (latest)
RefSeq assembly accession:: GCF_000385595.1 (suppressed)
RefSeq assembly and GenBank assembly identical:: yes
WGS Project:: AORE01
Assembly method:: CLC Genomic Workbench v. 6.0
Genome coverage:: 100.0x
Sequencing technology:: Illumina HiSeq

IDs: 651758 [UID] 651758 [GenBank] 1009428 [RefSeq]

See Genome Information for Neofusicoccum parvum

Pathogen Detection Resources

There are 27 assemblies for this organism

History (Show revision history)

Comment

Fungal strain available from Philippe Rolshausen, University of California, Botany and Plant Sciences Department, Riverside, CA 92521, USA

Global statistics

Total sequence length	42,592,847
Total ungapped length	42,523,501
Gaps between scaffolds	0
Number of scaffolds	1,297
Scaffold N50	83,561
Scaffold L50	149
Number of contigs	1,877
Contig N50	73,132
Contig L50	175
Total number of chromosomes and plasmids	0
Number of component sequences (WGS or clone)	1,877

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Assembly Information

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Nucleotide INSDC (GenBank)
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Taxonomy
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PubMed articles for this assembly

Draft Genome Sequence of Neofusicoccum parvum Isolate UCR-NP2, a Fungal Vascular Pathogen Associated with Grapevine Cankers.
Draft Genome Sequence of Neofusicoccum parvum Isolate UCR-NP2, a Fungal Vascular Pathogen Associated with Grapevine Cankers.
Blanco-Ulate B, Rolshausen P, Cantu D

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UCRNP2V3 - Genome - Assembly - NCBI
UCRNP2V3 - Genome - Assembly - NCBI

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Assembly Definition
Assembly Statistics

Global assembly definition

Download the full sequence report

The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

Primary Assembly

Molecule	Total Length	Scaffold Count	Ungapped Length	Scaffold N50	Spanned Gaps	Unspanned Gaps
unplaced	42,592,847	1,297	42,523,501	83,561	580	0