U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Download Assembly



ASM166257v1

Organism name:
Pseudogymnoascus sp. 23342-1-I1 (ascomycete fungi)
Infraspecific name:
Strain: 23342-1-I1
BioSample:
SAMN03382559
BioProject:
PRJNA276926
Submitter:
US Forest Service
Date:
2016/06/24
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_001662575.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
LAJL01
Assembly method:
CLC Genomics Workbench de novo v. 7.05
Expected final version:
yes
Genome coverage:
200.0x
Sequencing technology:
Illumina MiSeq

IDs: 763231 [UID] 3323168 [GenBank]

See Genome Information for Pseudogymnoascus sp. 23342-1-I1

History (Show revision history)

Comment

Global statistics

Total sequence length32,900,320
Total ungapped length32,859,415
Gaps between scaffolds0
Number of scaffolds978
Scaffold N50289,626
Scaffold L5036
Number of contigs1,356
Contig N50175,815
Contig L5061
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)1,356

Supplemental Content

PubMed articles for this assembly

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced32,900,32097832,859,415289,6263780