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ASM277137v1

Organism name:
Candidatus Woesebacteria bacterium CG22_combo_CG10-13_8_21_14_all_45_10 (bacteria)
Taxonomy check:
Inconclusive
Isolate:
CG22_combo_CG10-13_8_21_14_all_45_10
BioSample:
SAMN06659654
BioProject:
PRJNA362739
Submitter:
None
Date:
2017/11/14
Assembly type:
na
Assembly level:
Scaffold
Genome representation:
full
Excluded from RefSeq:
  • derived from metagenome
  • genus undefined
GenBank assembly accession:
GCA_002771375.1 (latest)
RefSeq assembly accession:
n/a
RefSeq assembly and GenBank assembly identical:
n/a
WGS Project:
PCSV01
Assembly method:
IDBA-UD v. 02.2016
Expected final version:
yes
Genome coverage:
10x
Sequencing technology:
Illumina HiSeq

IDs: 1439221 [UID] 5644098 [GenBank]

See Genome Information for Candidatus Woesebacteria bacterium CG22_combo_CG10-13_8_21_14_all_45_10

History (Show revision history)

Comment

Annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (released 2013). Information about the Pipeline can be found here: https://0-www-ncbi-nlm-nih-gov.brum.beds.ac.uk/genome/annotation_prok/

Genome-Annotation-Data

##Genome-Annotation-Data-START##
Annotation Provider::NCBI
Annotation Date::10/05/2017 16:34:47
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline
Annotation Method::Best-placed reference protein set; GeneMarkS+
Annotation Software revision::4.2
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA; repeat_region
Genes (total)::376
CDS (total)::360
Genes (coding)::333
CDS (coding)::333
Genes (RNA)::16
tRNAs::16
ncRNAs::0
Pseudo Genes (total)::27
Pseudo Genes (ambiguous residues)::24 of 27
Pseudo Genes (frameshifted)::0 of 27
Pseudo Genes (incomplete)::3 of 27
Pseudo Genes (internal stop)::0 of 27
##Genome-Annotation-Data-END##

Global statistics

Total sequence length308,689
Total ungapped length306,313
Gaps between scaffolds0
Number of scaffolds44
Scaffold N507,651
Scaffold L5013
Number of contigs102
Contig N505,667
Contig L5017
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)44

Supplemental Content

PubMed articles for this assembly

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced308,68944306,3137,651580

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Candidatus Woesebacteria bacterium CG22_combo_CG10-13_8_21_14_all_45_10Candidatus Woesebacteria bacterium CG22_combo_CG10-13_8_21_14_all_45_10

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
no-typeno-type

Best-matching type-strain assembly

AssemblySpecies nameType category
none-foundnana

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match typena0.000.00

ANI result

Taxonomy check statusBest match statusComment
Inconclusivenana