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ASM9154v1

Organism name:: Thermus thermophilus HB8 (bacteria)
Taxonomy check:: OK
Infraspecific name:: Strain: HB8
BioSample:: SAMD00061070
BioProject:: PRJNA13202
Submitter:: National Institute of Advanced Industrial Science and Technology, Japan
Date:: 2004/11/15
Assembly type:: na
Assembly level:: Complete Genome
Genome representation:: full
RefSeq category:: representative genome
Relation to type material:: assembly from type material
GenBank assembly accession:: GCA_000091545.1 (latest)
RefSeq assembly accession:: GCF_000091545.1 (latest)
RefSeq assembly and GenBank assembly identical:: yes

IDs: 113978 [UID] 112178 [GenBank] 113978 [RefSeq]

See Genome Information for Thermus thermophilus

Pathogen Detection Resources

There are 35 assemblies for this organism

History (Show revision history)

GenBank Assembly Accession		RefSeq Assembly Accession	Assembly Name	Assembly Level	Status
GCA_000091545.1	=	GCF_000091545.1	ASM9154v1	Complete Genome	Latest GenBank, Latest RefSeq

Comment

Genome-Annotation-Data

##Genome-Annotation-Data-START##Annotation Provider::NCBI RefSeq
Annotation Date::02/11/2024 01:19:53
Annotation Pipeline::NCBI Prokaryotic Genome Annotation Pipeline (PGAP)
Annotation Method::Best-placed reference protein set; GeneMarkS-2+
Annotation Software revision::6.6
Features Annotated::Gene; CDS; rRNA; tRNA; ncRNA
Genes (total)::2,280
CDSs (total)::2,223
Genes (coding)::2,168
CDSs (with protein)::2,168
Genes (RNA)::57
rRNAs::2, 2, 2 (5S, 16S, 23S)
complete rRNAs::2, 2, 2 (5S, 16S, 23S)
tRNAs::48
ncRNAs::3
Pseudo Genes (total)::55
CDSs (without protein)::55
Pseudo Genes (ambiguous residues)::0 of 55
Pseudo Genes (frameshifted)::26 of 55
Pseudo Genes (incomplete)::28 of 55
Pseudo Genes (internal stop)::5 of 55
Pseudo Genes (multiple problems)::4 of 55
CRISPR Arrays::9
##Genome-Annotation-Data-END##

Global statistics

Total sequence length	2,116,056
Total ungapped length	2,116,056
Total number of chromosomes and plasmids	3

Molecule name	GenBank sequence		RefSeq sequence
Chromosome	AP008226.1	=	NC_006461.1
Plasmid pTT8	AP008228.1	=	NC_006463.1
Plasmid pTT27	AP008227.1	=	NC_006462.1

Molecule	Total Length
All	2,116,056
Chromosome	1,849,742
Plasmid pTT8	9,322
Plasmid pTT27	256,992

	ANI	Query coverage	Subject coverage
Declared type	99.99	100.00	100.00
Best-match type	99.99	100.00	100.00

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ASM9154v1

See Genome Information for Thermus thermophilus

Pathogen Detection Resources

There are 35 assemblies for this organism

History (Show revision history)

Comment

Genome-Annotation-Data

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