txid39087[Organism] - Assembly

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Taxonomy

Arvicolinae

Arvicolinae is a subfamily of rodent in the family Cricetidae.

Taxonomy ID: 39087

Taxonomy browser Genomes

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Items: 1 to 20 of 35

Filters activated: Latest, Exclude anomalous. Clear all to show 39 items.

Select item 5044581.

MicOch1.0

Organism:: Microtus ochrogaster (prairie vole)

Sex:: female

Submitter:: Broad Institute

Date:: 2012/12/07

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_000317375.1 (latest)

RefSeq assembly accession:: GCF_000317375.1 (latest)

IDs:: 504458 [UID] 504458 [GenBank] 753838 [RefSeq]

Select item 216607312.

mMicPen1.hap1

Organism:: Microtus pennsylvanicus (meadow vole)

Sex:: male

Submitter:: Vertebrate Genomes Project

Date:: 2024/03/06

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_037038515.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 21660731 [UID] 54535498 [GenBank]

Select item 168141613.

mChiNiv1.1

Organism:: Chionomys nivalis (European snow vole)

Submitter:: WELLCOME SANGER INSTITUTE

Date:: 2023/05/01

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_950005125.1 (latest)

RefSeq assembly accession:: GCF_950005125.1 (latest)

IDs:: 16814161 [UID] 43202628 [GenBank] 43643398 [RefSeq]

Select item 100496914.

mArvAmp1.2

Organism:: Arvicola amphibius (Eurasian water vole)

Submitter:: Wellcome Sanger Institute

Date:: 2021/05/15

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_903992535.2 (latest)

RefSeq assembly accession:: GCF_903992535.2 (latest)

IDs:: 10049691 [UID] 26733828 [GenBank] 27360728 [RefSeq]

Select item 64542715.

Bank_vole1_10x

Organism:: Myodes glareolus (Bank vole)

Submitter:: LIV

Date:: 2020/02/22

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_902806735.1 (latest)

RefSeq assembly accession:: GCF_902806735.1 (latest)

IDs:: 6454271 [UID] 18105358 [GenBank] 33530638 [RefSeq]

Select item 134836516.

M_Fortis_MF-2015_v1.1

Organism:: Microtus fortis (reed vole)

Sex:: female

Submitter:: Shanghai Institute for Biological Sciences, Chinese Academy of Sciences

Date:: 2020/10/13

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_014885135.2 (latest)

RefSeq assembly accession:: GCF_014885135.2 (latest)

Release type:: Minor

IDs:: 13483651 [UID] 35175748 [GenBank] 35175768 [RefSeq]

Select item 158416717.

mMicCal1.0.hap1

Organism:: Microtus californicus (California vole)

Infraspecific name:: Ecotype: kernensis

Sex:: male

Submitter:: UCLA

Date:: 2023/02/07

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_028537955.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 15841671 [UID] 40664598 [GenBank]

Select item 202989418.

Marv_v2

Organism:: Microtus arvalis (Common vole)

Submitter:: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

Date:: 2023/12/20

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_963919715.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 20298941 [UID] 51363008 [GenBank]

Select item 22113719.

OndZib_v1_BIUU

Organism:: Ondatra zibethicus (muskrat)

Submitter:: Broad Institute

Date:: 2019/01/16

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_004026605.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 2211371 [UID] 8251278 [GenBank]

Select item 993885110.

Mior012

Organism:: Microtus oregoni (creeping vole)

Submitter:: Oklahoma State Universtiy

Date:: 2021/04/26

Assembly level:: Contig

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_018167655.1 (latest)

RefSeq assembly accession:: GCF_018167655.1 (latest)

IDs:: 9938851 [UID] 26498668 [GenBank] 26693648 [RefSeq]

Select item 645752111.

Field_vole_promethion_pilon

Organism:: Microtus agrestis (short-tailed field vole)

Submitter:: LIV

Date:: 2020/02/28

Assembly level:: Contig

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_902806775.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 6457521 [UID] 18107618 [GenBank]

Select item 1585229112.

ASM2855509v1

Organism:: Dicrostonyx torquatus (Arctic lemming)

Infraspecific name:: Ecotype: Chukotka

Sex:: female

Submitter:: University of Alaska Fairbanks

Date:: 2023/02/08

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_028555095.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 15852291 [UID] 40686388 [GenBank]

Select item 1585658113.

ASM1920688v2

Organism:: Microtus richardsoni (water vole)

Submitter:: IRIDIAN GENOMES

Date:: 2023/02/09

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_019206885.2 (latest)

RefSeq assembly accession:: n/a

IDs:: 15856581 [UID] 40702368 [GenBank]

Select item 1114530114.

ASM2039240v1

Organism:: Microtus montanus (montane vole)

Sex:: male

Submitter:: The Ohio State University

Date:: 2021/10/08

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_020392405.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 11145301 [UID] 29407808 [GenBank]

Select item 2029893115.

Aoec_v1

Organism:: Alexandromys oeconomus (root vole)

Submitter:: NORWEGIAN UNIVERSITY OF LIFE SCIENCES

Date:: 2023/12/20

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_963919705.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 20298931 [UID] 51362988 [GenBank]

Select item 1374810116.

SAF_Nshe_1.1

Organism:: Neodon shergylaensis (rodents)

Sex:: male

Submitter:: BGI

Date:: 2022/09/02

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_025134845.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 13748101 [UID] 35785468 [GenBank]

Select item 76909117.

ASM168507v1

Organism:: Ellobius lutescens (Transcaucasian mole vole)

Sex:: male

Submitter:: Erasmus medical center (ErasmusMC)

Date:: 2016/07/14

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_001685075.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 769091 [UID] 3342778 [GenBank]

Select item 76910118.

ETalpinus_0.1

Organism:: Ellobius talpinus (Northern mole vole)

Sex:: female

Submitter:: Erasmus medical center (ErasmusMC)

Date:: 2016/07/14

Assembly level:: Scaffold

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_001685095.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 769101 [UID] 3342798 [GenBank]

Select item 2165845119.

mMicPen1.hap2

Organism:: Microtus pennsylvanicus (meadow vole)

Sex:: male

Submitter:: Vertebrate Genomes Project

Date:: 2024/03/06

Assembly level:: Chromosome

Genome representation:: full

GenBank assembly accession:: GCA_037039175.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 21658451 [UID] 54535458 [GenBank]

Select item 236198120.

ASM436859v1

Organism:: Myodes glareolus (Bank vole)

Sex:: male

Submitter:: Lund University

Date:: 2019/03/26

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_004368595.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 2361981 [UID] 8798438 [GenBank]

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