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ASM156241v1

Organism name:
Thermotalea metallivorans (firmicutes)
Taxonomy check:
OK
Infraspecific name:
Strain: B2-1
BioSample:
SAMN04038072
BioProject:
PRJNA294866
Submitter:
Bharat Patel
Date:
2016/02/17
Assembly type:
na
Assembly level:
Contig
Genome representation:
full
RefSeq category:
representative genome
Relation to type material:
assembly from type material
GenBank assembly accession:
GCA_001562415.1 (latest)
RefSeq assembly accession:
GCF_001562415.1 (latest)
RefSeq assembly and GenBank assembly identical:
yes
WGS Project:
LOEE01
Assembly method:
SPAdes v. 3.5
Expected final version:
yes
Genome coverage:
50.0x
Sequencing technology:
Illumina MiSeq

IDs: 642431 [UID] 2880208 [GenBank] 3406628 [RefSeq]

See Genome Information for Thermotalea metallivorans

History (Show revision history)

Comment

Annotated using prokka 1.12-beta from https://github.com/tseemann/prokka

Global statistics

Total sequence length3,094,505
Total ungapped length3,094,505
Number of contigs110
Contig N5066,419
Contig L5012
Total number of chromosomes and plasmids0
Number of component sequences (WGS or clone)110

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Contig
Count
Ungapped
Length
Contig
N50
Spanned
Gaps
Unspanned
Gaps
unplaced3,094,5051103,094,50566,41900

Assembly QA

Taxonomy Check Data

Declared organism

Organism nameSpecies name
Thermotalea metallivoransThermotalea metallivorans

Best-matching type-strain assembly for declared species

AssemblyOrganism nameType category
samena

Best-matching type-strain assembly

AssemblySpecies nameType category
GCA_000518565.1Thermoanaerobacter thermocopriaesuspected-type

Average Nucleotide Identity (ANI) data

ANIQuery coverageSubject coverage
Declared typenanana
Best-match type96.831.732.19

ANI result

Taxonomy check statusBest match statusComment
OKlow-coverageAssembly is the type-strain, no match is expected