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Taxonomy

Taeniopygia guttata

Zebra finch (Taeniopygia guttata) is a species of bird in the family Estrildidae.

Taxonomy ID: 59729

Search results

Items: 15

  • Filters activated: Latest, Exclude anomalous. Clear all to show 25 items.
1.

bTaeGut1.4.pri

Organism:
Taeniopygia guttata (zebra finch)
Sex:
male
Submitter:
Vertebrate Genomes Project
Date:
2021/05/04
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_003957565.4 (latest)
RefSeq assembly accession:
GCF_003957565.2 (latest)
IDs:
10005361 [UID] 26615478 [GenBank] 26711698 [RefSeq]
2.

bTaeGut2.mat.v3

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
Vertebrate Genomes Project
Date:
2020/02/21
Assembly type:
haploid (maternal haplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_008822115.3 (latest)
RefSeq assembly accession:
n/a
IDs:
5966551 [UID] 17077798 [GenBank]
3.

bTaeGut2pat

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
Vertebrate Genomes Project
Date:
2019/10/03
Assembly type:
haploid (paternal haplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_008822125.1 (latest)
RefSeq assembly accession:
n/a
IDs:
4781141 [UID] 14231518 [GenBank]
4.

bTaeGut2.pri.v2

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
Vertebrate Genomes Project
Date:
2020/04/01
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_009859065.2 (latest)
RefSeq assembly accession:
n/a
IDs:
6491091 [UID] 18204948 [GenBank]
5.

Tgut_diploid_1.0

Organism:
Taeniopygia guttata (zebra finch)
Sex:
male
Submitter:
Pacific Biosciences
Date:
2017/02/28
Assembly type:
haploid-with-alt-loci
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_002008985.2 (latest)
RefSeq assembly accession:
n/a
Release type:
Minor
IDs:
1022081 [UID] 4187728 [GenBank]
6.

bTaeGut1.4.alt

Organism:
Taeniopygia guttata (zebra finch)
Sex:
male
Submitter:
Vertebrate Genomes Project
Date:
2021/04/28
Assembly type:
alternate-pseudohaplotype (alternate pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_003957525.2 (latest)
RefSeq assembly accession:
n/a
IDs:
9936821 [UID] 26486008 [GenBank]
7.

zebrafinch.phase1_scaffolds

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
PacBio
Date:
2020/04/06
Assembly type:
alternate-pseudohaplotype (alternate pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_012069595.1 (latest)
RefSeq assembly accession:
n/a
IDs:
6607961 [UID] 18439098 [GenBank]
8.

zebrafinch.phase1_contigs

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
PacBio
Date:
2020/04/06
Assembly type:
alternate-pseudohaplotype (alternate pseudohaplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_012069575.1 (latest)
RefSeq assembly accession:
n/a
IDs:
6608231 [UID] 18439198 [GenBank]
9.

zebrafinch.phase0_contigs

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
PacBio
Date:
2020/04/06
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_012069615.1 (latest)
RefSeq assembly accession:
n/a
IDs:
6608371 [UID] 18439258 [GenBank]
10.

zebrafinch.Unzip_purge_primary

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
PacBio
Date:
2020/04/06
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_012069585.1 (latest)
RefSeq assembly accession:
n/a
IDs:
6608161 [UID] 18439188 [GenBank]
11.

zebrafinch.phase0_scaffolds

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
PacBio
Date:
2020/04/06
Assembly type:
haploid (principal pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_012069605.1 (latest)
RefSeq assembly accession:
n/a
IDs:
6607981 [UID] 18439118 [GenBank]
12.

bTaeGut2.p.v1.alt

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
Vertebrate Genomes Project
Date:
2020/01/13
Assembly type:
alternate-pseudohaplotype (alternate pseudohaplotype of diploid)
Assembly level:
Scaffold
Genome representation:
full
GenBank assembly accession:
GCA_009859025.1 (latest)
RefSeq assembly accession:
n/a
IDs:
5454751 [UID] 15778978 [GenBank]
13.

zebrafinch.Unzip_purge_haplotigs

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
PacBio
Date:
2020/04/06
Assembly type:
alternate-pseudohaplotype (alternate pseudohaplotype of diploid)
Assembly level:
Contig
Genome representation:
full
GenBank assembly accession:
GCA_012069535.1 (latest)
RefSeq assembly accession:
n/a
IDs:
6618251 [UID] 18439058 [GenBank]
14.

bTaeGut2.pat.W.v2

Organism:
Taeniopygia guttata (zebra finch)
Sex:
female
Submitter:
Vertebrate Genomes Project
Date:
2020/02/12
Assembly level:
Chromosome
Genome representation:
full
GenBank assembly accession:
GCA_008822105.2 (latest)
RefSeq assembly accession:
GCF_008822105.2 (suppressed)
Excluded from RefSeq:
superseded by newer assembly for species
IDs:
5966711 [UID] 17077808 [GenBank] 17341008 [RefSeq]
15.

Taeniopygia_guttata-3.2.4

Organism:
Taeniopygia guttata (zebra finch)
Sex:
male
Submitter:
Washington University Genome Sequencing Center
Date:
2013/02/08
Assembly level:
Chromosome
Genome representation:
full
Synonyms:
taeGut1
GenBank assembly accession:
GCA_000151805.2 (latest)
RefSeq assembly accession:
GCF_000151805.1 (suppressed)
Excluded from RefSeq:
superseded by newer assembly for species
IDs:
524908 [UID] 538328 [GenBank] 524908 [RefSeq]
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