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Assembly

Genome Assembly

Taxonomy

Vertebrata

Vertebrates (Vertebrata) is a classification in the phylum Chordata (chordates).

Taxonomy ID: 7742

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Items: 1 to 20 of 4833

Filters activated: Latest, Exclude anomalous. Clear all to show 5551 items.

Select item 119682111.

GRCh38.p14

Genome Reference Consortium Human Build 38 patch release 14 (GRCh38.p14)

Organism:: Homo sapiens (human)

Submitter:: Genome Reference Consortium

Date:: 2022/02/03

Assembly type:: haploid-with-alt-loci

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: reference genome

Synonyms:: hg38

GenBank assembly accession:: GCA_000001405.29 (latest)

RefSeq assembly accession:: GCF_000001405.40 (latest)

Release type:: Patch

IDs:: 11968211 [UID] 31457668 [GenBank] 31649238 [RefSeq]

Select item 73587412.

GRCm39

Genome Reference Consortium Mouse Build 39

Organism:: Mus musculus (house mouse)

Infraspecific name:: Strain: C57BL/6J

Submitter:: Genome Reference Consortium

Date:: 2020/06/24

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: reference genome

Synonyms:: mm39

GenBank assembly accession:: GCA_000001635.9 (latest)

RefSeq assembly accession:: GCF_000001635.27 (latest)

IDs:: 7358741 [UID] 20371618 [GenBank] 20412818 [RefSeq]

Select item 11046213.

GRCz11

Genome Reference Consortium Zebrafish Build 11

Organism:: Danio rerio (zebrafish)

Infraspecific name:: Strain: Tuebingen

Submitter:: Genome Reference Consortium

Date:: 2017/05/09

Assembly type:: haploid-with-alt-loci

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: reference genome

Synonyms:: danRer11

GenBank assembly accession:: GCA_000002035.4 (latest)

RefSeq assembly accession:: GCF_000002035.6 (latest)

IDs:: 1104621 [UID] 4482478 [GenBank] 4514068 [RefSeq]

Select item 11615414.

ASM223467v1

Organism:: Oryzias latipes (Japanese medaka)

Infraspecific name:: Strain: Hd-rR

Sex:: male

Submitter:: The University of Tokyo

Date:: 2017/07/27

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_002234675.1 (latest)

RefSeq assembly accession:: GCF_002234675.1 (latest)

IDs:: 1161541 [UID] 4843688 [GenBank] 5973118 [RefSeq]

Select item 22099815.

ASM402354v1

Organism:: Lateolabrax maculatus (spotted sea bass)

Sex:: male

Submitter:: BGI

Date:: 2019/01/15

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_004023545.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 2209981 [UID] 8246138 [GenBank]

Select item 62780416.

AWG_v2

Organism:: Coregonus sp. 'balchen' (bony fishes)

Submitter:: EAWAG

Date:: 2020/03/10

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_902810595.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 6278041 [UID] 17728368 [GenBank]

Select item 104530517.

mAcoKem2_REL_1905

Organism:: Acomys kempi (Kemp's spiny mouse)

Submitter:: WELLCOME TRUST SANGER INSTITUTE

Date:: 2021/07/06

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_907164505.1 (latest)

RefSeq assembly accession:: n/a

IDs:: 10453051 [UID] 27758268 [GenBank]

Select item 90791118.

mRatBN7.2

Organism:: Rattus norvegicus (Norway rat)

Infraspecific name:: Strain: BN/NHsdMcwi

Sex:: male

Submitter:: Wellcome Sanger Institute

Date:: 2020/11/10

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_015227675.2 (latest)

RefSeq assembly accession:: GCF_015227675.2 (latest)

Release type:: Minor

IDs:: 9079111 [UID] 24462838 [GenBank] 24464048 [RefSeq]

Select item 10041919.

Sscrofa11.1

Sscrofa11 with Y sequences from WTSI_X_Y_pig V2

Organism:: Sus scrofa (pig)

Infraspecific name:: Breed: Duroc

Sex:: female

Submitter:: The Swine Genome Sequencing Consortium (SGSC)

Date:: 2017/02/07

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: susScr11

GenBank assembly accession:: GCA_000003025.6 (latest)

RefSeq assembly accession:: GCF_000003025.6 (latest)

IDs:: 1004191 [UID] 4121818 [GenBank] 4192498 [RefSeq]

Select item 1279528110.

ARS-UCD1.3

Organism:: Bos taurus (cattle)

Infraspecific name:: Breed: Hereford

Sex:: female

Submitter:: USDA ARS

Date:: 2018/04/11

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: bosTau9

GenBank assembly accession:: GCA_002263795.3 (latest)

RefSeq assembly accession:: GCF_002263795.2 (latest)

Release type:: Minor

IDs:: 12795281 [UID] 33429948 [GenBank] 33429968 [RefSeq]

Select item 915833111.

bGalGal1.mat.broiler.GRCg7b

bGalGal1 maternal broiler GRCg7b

Organism:: Gallus gallus (chicken)

Infraspecific name:: Breed: Cross of Broiler mother + white leghorn layer father

Sex:: female

Submitter:: Vertebrate Genomes Project

Date:: 2021/01/19

Assembly type:: haploid (principal pseudohaplotype of diploid)

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_016699485.1 (latest)

RefSeq assembly accession:: GCF_016699485.2 (latest)

Release type:: Minor

IDs:: 9158331 [UID] 24650218 [GenBank] 25808658 [RefSeq]

Select item 803091112.

ROS_Cfam_1.0

Organism:: Canis lupus familiaris (dog)

Infraspecific name:: Breed: Labrador retriever

Sex:: male

Submitter:: The Roslin Institute

Date:: 2020/09/03

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_014441545.1 (latest)

RefSeq assembly accession:: GCF_014441545.1 (latest)

IDs:: 8030911 [UID] 21981068 [GenBank] 23482308 [RefSeq]

Select item 968748113.

mCanLor1.2

Organism:: Canis lupus (gray wolf)

Submitter:: WELLCOME SANGER INSTITUTE

Date:: 2021/03/26

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_905319855.2 (latest)

RefSeq assembly accession:: n/a

IDs:: 9687481 [UID] 25914118 [GenBank]

Select item 234505114.

Mmul_10

Organism:: Macaca mulatta (Rhesus monkey)

Sex:: female

Submitter:: The Genome Institute at Washington University School of Medicine

Date:: 2019/02/13

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: rheMac10

GenBank assembly accession:: GCA_003339765.3 (latest)

RefSeq assembly accession:: GCF_003339765.1 (latest)

IDs:: 2345051 [UID] 8740558 [GenBank] 8775378 [RefSeq]

Select item 921974115.

ARS-UI_Ramb_v2.0

Organism:: Ovis aries (sheep)

Infraspecific name:: Breed: Rambouillet
Infraspecific name:: Strain: OAR_USU_Benz2616

Sex:: female

Submitter:: University of Idaho

Date:: 2021/02/03

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_016772045.1 (latest)

RefSeq assembly accession:: GCF_016772045.1 (latest)

IDs:: 9219741 [UID] 24832408 [GenBank] 27481198 [RefSeq]

Select item 980971116.

Xenopus_laevis_v10.1

Organism:: Xenopus laevis (African clawed frog)

Infraspecific name:: Strain: J_2021

Sex:: female

Submitter:: International Xenopus Sequencing Consortium

Date:: 2021/04/12

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_017654675.1 (latest)

RefSeq assembly accession:: GCF_017654675.1 (latest)

IDs:: 9809711 [UID] 26202298 [GenBank] 26275468 [RefSeq]

Select item 78631117.

ARS1

Old name: ASM170441v1

Organism:: Capra hircus (goat)

Infraspecific name:: Breed: San Clemente

Sex:: male

Submitter:: USDA ARS

Date:: 2016/08/24

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_001704415.1 (latest)

RefSeq assembly accession:: GCF_001704415.1 (latest)

IDs:: 786311 [UID] 3415568 [GenBank] 3423208 [RefSeq]

Select item 151201118.

EquCab3.0

Organism:: Equus caballus (horse)

Infraspecific name:: Breed: thoroughbred

Sex:: female

Submitter:: University of Louisville

Date:: 2018/01/05

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: equCab3

GenBank assembly accession:: GCA_002863925.1 (latest)

RefSeq assembly accession:: GCF_002863925.1 (latest)

IDs:: 1512011 [UID] 5843558 [GenBank] 5863628 [RefSeq]

Select item 814757119.

USDA_OmykA_1.1

Organism:: Oncorhynchus mykiss (rainbow trout)

Sex:: male

Submitter:: USDA/ARS

Date:: 2020/09/23

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

GenBank assembly accession:: GCA_013265735.3 (latest)

RefSeq assembly accession:: GCF_013265735.2 (latest)

IDs:: 8147571 [UID] 22263958 [GenBank] 22454928 [RefSeq]

Select item 18249120.

OryCun2.0

Organism:: Oryctolagus cuniculus (rabbit)

Infraspecific name:: Breed: Thorbecke inbred

Sex:: female

Submitter:: The Genome Sequencing Platform, The Assembly Computation and Development Core Team

Date:: 2009/10/20

Assembly level:: Chromosome

Genome representation:: full

RefSeq category:: representative genome

Synonyms:: oryCun2

GenBank assembly accession:: GCA_000003625.1 (latest)

RefSeq assembly accession:: GCF_000003625.3 (latest)

IDs:: 182491 [UID] 5128 [GenBank] 1097738 [RefSeq]

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