txid905[Organism] - Assembly

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Taxonomy

Acidaminococcus fermentans

Acidaminococcus fermentans is a species of firmicute in the family Acidaminococcaceae.

Taxonomy ID: 905

Genomes

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Items: 1 to 20 of 36

Filters activated: Latest, Exclude anomalous. Clear all to show 41 items.

Select item 1077081.

ASM2530v1

Organism:: Acidaminococcus fermentans DSM 20731 (firmicutes)

Infraspecific name:: Culture-collection: DSM:20731, ATCC 25085
Infraspecific name:: Strain: DSM 20731

Submitter:: US DOE Joint Genome Institute (JGI-PGF)

Date:: 2010/01/15

Assembly level:: Complete Genome

Genome representation:: full

RefSeq category:: representative genome

Relation to type material:: assembly from type material

GenBank assembly accession:: GCA_000025305.1 (latest)

RefSeq assembly accession:: GCF_000025305.1 (latest)

IDs:: 107708 [UID] 26108 [GenBank] 107708 [RefSeq]

Select item 113746712.

ASM2073564v1

Organism:: Acidaminococcus fermentans DSM 20731 (firmicutes)

Infraspecific name:: Strain: FDAARGOS_1571

Submitter:: US Food and Drug Administration

Date:: 2021/11/03

Assembly level:: Complete Genome

Genome representation:: full

GenBank assembly accession:: GCA_020735645.1 (latest)

RefSeq assembly accession:: GCF_020735645.1 (latest)

IDs:: 11374671 [UID] 29943258 [GenBank] 29955818 [RefSeq]

Select item 53505213.

ASM969667v1

Organism:: Acidaminococcus fermentans (firmicutes)

Infraspecific name:: Culture-collection: DSM:105754
Infraspecific name:: Strain: WCA-389-WT-5B

Submitter:: UniKlinik RWTH Aachen

Date:: 2019/11/22

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_009696675.1 (latest)

RefSeq assembly accession:: GCF_009696675.1 (latest)

IDs:: 5350521 [UID] 15482708 [GenBank] 15504448 [RefSeq]

Select item 8677414.

IMG-taxon 2654588173 annotated assembly

Organism:: Acidaminococcus fermentans (firmicutes)

Infraspecific name:: Strain: WCC6

Submitter:: DOE - JOINT GENOME INSTITUTE

Date:: 2016/10/22

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_900107075.1 (latest)

RefSeq assembly accession:: GCF_900107075.1 (latest)

IDs:: 867741 [UID] 3640838 [GenBank] 3910138 [RefSeq]

Select item 8805815.

IMG-taxon 2593339211 annotated assembly

Organism:: Acidaminococcus fermentans (firmicutes)

Infraspecific name:: Strain: pGA-4

Submitter:: DOE - JOINT GENOME INSTITUTE

Date:: 2016/11/02

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_900115425.1 (latest)

RefSeq assembly accession:: GCF_900115425.1 (latest)

IDs:: 880581 [UID] 3700908 [GenBank] 3910698 [RefSeq]

Select item 212038216.

ASM3631406v1

Organism:: Acidaminococcus fermentans (firmicutes)

Infraspecific name:: Strain: P41

Submitter:: Chinese Academy of Agricultural Sciences

Date:: 2024/01/31

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_036314065.1 (latest)

RefSeq assembly accession:: GCF_036314065.1 (latest)

IDs:: 21203821 [UID] 53356528 [GenBank] 53375408 [RefSeq]

Select item 212227717.

ASM3635002v1

Organism:: Acidaminococcus fermentans (firmicutes)

Infraspecific name:: Strain: P47

Submitter:: Chinese Academy of Agricultural Sciences

Date:: 2024/02/03

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_036350025.1 (latest)

RefSeq assembly accession:: GCF_036350025.1 (latest)

IDs:: 21222771 [UID] 53412838 [GenBank] 53425178 [RefSeq]

Select item 16484118.

Rumen uncultured genome RUG045

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: THE ROSLIN INSTITUTE

Date:: 2018/03/21

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_900314805.1 (latest)

RefSeq assembly accession:: GCF_900314805.1 (latest)

IDs:: 1648411 [UID] 6280798 [GenBank] 6304178 [RefSeq]

Select item 137881419.

SRR15732360_bin.31_metaWRAP_v1.3_MAG

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: EMG

Date:: 2022/09/09

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_945868645.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: derived from metagenome, genome length too small

IDs:: 13788141 [UID] 35877218 [GenBank]

Select item 2013648110.

H07649-L1_cleanbin_000007_GreatApes

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: Institute of Clinical Molecular Biology, University of Kiel, Germany

Date:: 2023/12/06

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_963628945.1 (latest)

RefSeq assembly accession:: n/a

Excluded from RefSeq:: derived from metagenome

IDs:: 20136481 [UID] 51003068 [GenBank]

Select item 1532295111.

ERR1190886_bin.65_CONCOCT_v1.1_MAG

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: European Bioinformatics Institute

Date:: 2023/01/10

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_937926385.1 (latest)

RefSeq assembly accession:: GCF_937926385.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 15322951 [UID] 39453628 [GenBank] 42133538 [RefSeq]

Select item 1547969112.

ERR1305892_bin.3_CONCOCT_v1.1_MAG

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: European Bioinformatics Institute

Date:: 2023/01/10

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_937922505.1 (latest)

RefSeq assembly accession:: GCF_937922505.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 15479691 [UID] 39804598 [GenBank] 42563018 [RefSeq]

Select item 1379638113.

SRR11489758_bin.77_metaWRAP_v1.3_MAG

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: EMG

Date:: 2022/09/10

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_945915305.1 (latest)

RefSeq assembly accession:: GCF_945915305.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 13796381 [UID] 35896858 [GenBank] 42130598 [RefSeq]

Select item 1242478114.

ASM2277308v1

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: AAFC

Date:: 2022/03/31

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_022773085.1 (latest)

RefSeq assembly accession:: GCF_022773085.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 12424781 [UID] 32533498 [GenBank] 42116838 [RefSeq]

Select item 1593760115.

ASM2872232v1

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: Agriculture and Agri-Food Canada

Date:: 2023/02/18

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_028722325.1 (latest)

RefSeq assembly accession:: GCF_028722325.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 15937601 [UID] 40901078 [GenBank] 42133718 [RefSeq]

Select item 1765114116.

ERR9322428_bin.10_MetaWRAP_v1.3_MAG

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: EMG

Date:: 2023/07/18

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_958410645.1 (latest)

RefSeq assembly accession:: GCF_958410645.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 17651141 [UID] 45233848 [GenBank] 45361518 [RefSeq]

Select item 1174533117.

ASM2144380v1

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: Brazilian Center for Research in Energy and Materials (CNPEM)

Date:: 2022/01/12

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_021443805.1 (latest)

RefSeq assembly accession:: GCF_021443805.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 11745331 [UID] 30923178 [GenBank] 42115278 [RefSeq]

Select item 120677118.

ASM232005v1

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: University of Queensland

Date:: 2017/09/21

Assembly level:: Scaffold

Genome representation:: full

GenBank assembly accession:: GCA_002320055.1 (latest)

RefSeq assembly accession:: GCF_002320055.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 1206771 [UID] 5038458 [GenBank] 42104658 [RefSeq]

Select item 2195815119.

ASM3735444v1

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: Helmholtz Centre for Infection Research

Date:: 2024/03/19

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_037354445.1 (latest)

RefSeq assembly accession:: GCF_037354445.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 21958151 [UID] 55219628 [GenBank] 55305788 [RefSeq]

Select item 1994608120.

ASM3408886v1

Organism:: Acidaminococcus fermentans (firmicutes)

Submitter:: Agriculture and Agri-Food Canada

Date:: 2023/12/04

Assembly level:: Contig

Genome representation:: full

GenBank assembly accession:: GCA_034088865.1 (latest)

RefSeq assembly accession:: GCF_034088865.1 (latest)

Excluded from RefSeq:: derived from metagenome

IDs:: 19946081 [UID] 50598278 [GenBank] 50637348 [RefSeq]

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Assembly
Homo sapiens cDNA FLJ23823 fis, clone HUV00563, highly similar to Homo sapiens N...
Homo sapiens cDNA FLJ23823 fis, clone HUV00563, highly similar to Homo sapiens NADPH-dependent FMN and FAD containing oxidoreductase (NR1) mRNA
gi|18676996|dbj|AK074403.1|

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