This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA205157; GEO: GSE47220 |
| Type | Umbrella project |
| Publications | Chen Y et al., "ETS factors reprogram the androgen receptor cistrome and prime prostate tumorigenesis in response to PTEN loss.", Nat Med, 2013 Aug;19(8):1023-9 |
| Submission | Registration date: 23-May-2013
Chen, Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 25 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 25 |
| GEO DataSets | 6 |
GEO Data Details| Parameter | Value |
|---|
| Data volume, Spots | 1278737 |
| Data volume, Processed Mbytes | 38 |
| Data volume, Supplementary Mbytes | 19 |
| Parameter | Value |
|---|
| Data volume, Gbases | 83 |
| Data volume, Mbytes | 55385 |
This project encompasses the following 5 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 2 |
BioProject
accession | Organism | Title |
|---|
| PRJNA203679 | Homo sapiens | Effect of ETV1 knockdown on genome wide AR binding in LNCaP Cells (Chen, Human Oncology and...) | | PRJNA203677 | Mus musculus | Genomic mapping of ERG, AR, histone H3 monomethyl-K4, histone H3 trimethyl-K4 binding sites in mouse prostates in WT, ERG overexpression, Pten loss mouse prostates (Chen, Human Oncology and...) |
|
| Transcriptome or Gene expression | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA202375 | Homo sapiens | Gene expression profile of ETV1 knockdown in LNCaP prostate cancer cells (Chen, Human Oncology and...) | | PRJNA202377 | Mus musculus | Expression profile of Pten loss and ERG overexpression in mouse prostate (Chen, Human Oncology and...) | | PRJNA198808 | Mus musculus | Response to catration in PTEN null and PTEN null ERG expressing mouse prostates (Chen, Human Oncology and...) |
|