Description: This is a general umbrella bioproject that spans multiple research efforts within the FDA foods program (FDA-CFSAN, FDA-ORA, and FDA-CVM). These efforts include characterizing food microbiomes, antimicrobial resistance in foods, identifying various food contaminants like microbial pathogens or significant insect debris, and pilot efforts like MetaGenomeTrakr.
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 1199 |
| Other datasets |
| BioSample | 1194 |
Food production metagenome encompasses the following 9 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : SRA or Trace No data links Total |
1
1
2
|
|
| Umbrella project | 6 |
BioProject
accession | Name | Title |
|---|
| PRJNA429792 | Antimicrobial resistance in foods | Antimicrobial resistance in foods (FDA) | | PRJNA429788 | Food microbiome | Food microbiome (FDA) | | PRJNA429791 | Mitochontrakr | Mitochontrakr (FDA) | | PRJNA429789 | Modeling | Modeling (FDA) | | PRJNA429787 | Pathogen genome tracking from metagenome | Pathogen genome tracking from metagenome (FDA) | | PRJNA530970 | food production metagenome | FDA's MetagenomeTrakr Pilot Project (FDA Center for Food Safety...) |
Less... |
| metagenome | 1 |
|