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Genome Information for Hydra vulgaris
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2 additional projects are components of the Generic and context-dependent gene modulations during Hydra whole body regeneration.
Transgenics Hydra expressing eGFP in interstitial stem-cells (ISC), gastrodermal epithelial cells (gESC) or epidermal epithelial cells (eESC) were used to sort these populations of stem cells by Fluorescence activated cell sorting (FACS) and perform RNA-seq on enriched populations. The processed data deposited here are also accessible in a graphical manner from a blast-based web interface available at https://hydratlas.unige.ch
Overall design: Three or four replicates per sample, variable number of days of starvation.
>> Grant Information <<
Awarded to Dr. Brigitte Galliot:
- Swiss National Science Foundation (SNF grant 31003A-130337,
31003A_149630 & 31003_169930)
- NCCR Frontiers in Genetics, Stem Cells & Regeneration project
- The Canton of Geneva
- The Claraz donation
- Human Frontier Science Program (HFSP RHP0016-2010)
| Accession | PRJNA437309; GEO: GSE111533 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Hydra vulgaris[Taxonomy ID: 6087] Eukaryota; Metazoa; Cnidaria; Hydrozoa; Hydroidolina; Anthoathecata; Aplanulata; Hydridae; Hydra; Hydra vulgaris |
| Submission | Registration date: 7-Mar-2018
B. Galliot, Genetics and Evolution, University of Geneva |
| Relevance | Unknown |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 22 |
| Other datasets |
| BioSample | 22 |
| GEO DataSets | 1 |