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7 additional projects are components of the CoBATCH for high-throughput single-cell epigenomic profiling.
we develop a robut low input cell and high throughput single cell ChIP method used for both native and fixed in vitro cultured cells and intact tissue
Overall design: we fused Protein A to the N-terminal of Tn5 to generated Protein A-Tn5 fusion enzyme, the ProteinA-Tn5-complex is enriched through specific antibodies to genomic regions and Tn5 generates indexed chromatin fragments ready for the library preparation and sequencing
| Accession | PRJNA531006; GEO: GSE129327 |
| Data Type | Epigenomics |
| Scope | Multiisolate |
| Organism | Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus |
| Publications | Wang Q et al., "CoBATCH for High-Throughput Single-Cell Epigenomic Profiling.", Mol Cell, 2019 Oct 3;76(1):206-216.e7 |
| Submission | Registration date: 4-Apr-2019
Peking University |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 3057 |
| Publications |
| PubMed | 1 |
| Other datasets |
| BioSample | 3057 |
| GEO DataSets | 1 |