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Accession: PRJNA657258 ID: 657258

Lytechinus variegatus isolate:NC3 (green sea urchin)

Lytechinus variegatus genome assembly v 3.0

See Genome Information for Lytechinus variegatus
Chromosomal-level genome assembly for the sea urchin Lytechinus variegatus
AccessionPRJNA657258
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismLytechinus variegatus[Taxonomy ID: 7654]
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Temnopleuroida; Toxopneustidae; Lytechinus; Lytechinus variegatus
Publications
  • Davidson PL et al., "Chromosomal-Level Genome Assembly of the Sea Urchin Lytechinus variegatus Substantially Improves Functional Genomic Analyses.", Genome Biol Evol, 2020 Jul 1;12(7):1080-1086
  • Bronstein O et al., "The first mitochondrial genome of the model echinoid Lytechinus variegatus and insights into Odontophoran phylogenetics.", Genomics, 2019 Jul;111(4):710-718
Grants
  • "Evolution of a developmental gene regulatory network during a life history switch in Heliocidaris" (Grant ID 1929934, National Science Foundation)
  • "Embryonic Cell Recognition: Specificity Determinants" (Grant ID R01 HD014483, National Institute of Child Health & Human Development)
SubmissionRegistration date: 26-Apr-2021
Duke University
Related Resources
RelevanceEvolution
Locus Tag PrefixH7X96
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)20
WGS master1
Publications
PubMed2
PMC1
Other datasets
BioSample1
Assembly1
Related RefSeq Project
PRJNA729485 : Lytechinus variegatus isolate:NC3 RefSeq Assembly

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