Basal gene expression of Xiphophorus skin over a 2... (ID 667105) - BioProject

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Accession: PRJNA667105 ID: 667105

Basal gene expression of Xiphophorus skin over a 24 hour period (southern platyfish)

See Genome Information for Xiphophorus maculatus

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8 additional projects are related by organism.

Gene expression profiles of Xiphophorus skin over a 24 hour period were established to identify cyclic transcriptional patterns Overall design: Fish were euthanized every 3 hours throughtout a day for transcriptome profiling using RNA-Seq. More...

Accession	PRJNA667105; GEO: GSE158968
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Xiphophorus maculatus[Taxonomy ID: 8083] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Xiphophorus; Xiphophorus maculatus
Publications	Lu Y et al., "Global assessment of organ specific basal gene expression over a diurnal cycle with analyses of gene copies exhibiting cyclic expression patterns.", BMC Genomics, 2020 Nov 11;21(1):787
Grants	"Enhanced Development of the Xiphophorus Model System" (Grant ID R24 OD011120, Office of the Director) "Enhanced Development of the Xiphophorus Model System" (Grant ID R24 OD011120, Office of the Director) "South Texas Doctoral Bridge Program" (Grant ID R25 GM102783, National Institute of General Medical Sciences) "Identification and Characterization of a Endogenous EGFR Regulatory Locus in Xiphophorus Genome" (Grant ID R15 CA223964, National Cancer Institute)
Submission	Registration date: 2-Oct-2020 Xiphophorus Genetic Stock Center
Relevance	Unknown

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	24
Publications
PubMed	1
PMC	1
Other datasets
BioSample	24
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	1

SRA Data Details

Parameter	Value
Data volume, Gbases	61
Data volume, Mbytes	24773

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Basal gene expression of Xiphophorus skin over a 24 hour period (southern platyfish)

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