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Accession: PRJNA701060 ID: 701060

ATAC-seq data of control and Activin-treated amphioxus ectodermal explants at 11 hpf and 19 hpf. (amphioxus)

See Genome Information for Branchiostoma lanceolatum
The goal of this projet was to identify genomic region showing differential accessibility between control and Activin-treated amphioxus explants at two time points (gastrula and neurula stage) Overall design: Two replicates were obtained for each condition (time/treatment).
AccessionPRJNA701060; GEO: GSE166495
Data TypeEpigenomics
ScopeMultiisolate
OrganismBranchiostoma lanceolatum[Taxonomy ID: 7740]
Eukaryota; Metazoa; Chordata; Cephalochordata; Leptocardii; Amphioxiformes; Branchiostomatidae; Branchiostoma; Branchiostoma lanceolatum
PublicationsLeon A et al., "Gene Regulatory Networks of Epidermal and Neural Fate Choice in a Chordate.", Mol Biol Evol, 2022 Apr 11;39(4)
SubmissionRegistration date: 9-Feb-2021
CABD/CSIC
RelevanceUnknown
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments8
Publications
PubMed1
PMC1
Other datasets
BioSample8
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases52
Data volume, Mbytes26030

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