U.S. flag

An official website of the United States government

Display Settings:

Format

Send to:

Choose Destination
Accession: PRJNA773609 ID: 773609

Comparative Metagenomics of Paddy Microbiome

DNA extraction from bulk soil, rhizoplane, rhizosphere and phyllosphere of paddy plant over 3 growing seasons. More...
AccessionPRJNA773609
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 22-Oct-2021
AIMST University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)140
Other datasets
BioSample141
Assembly140
Assembly details:
Assembly levelNumber of Assemblies
140
140
AssemblyLevelWGSBioSampleIsolateTaxonomy
GCA_037916235.1ContigJBAIYB000000000SAMN38376967
bin_46
GCA_037917115.1ContigJBAIWS000000000SAMN38376932
bin_115
GCA_033854475.1ContigJAWOKA000000000SAMN37852428
bin_112_1
GCA_033854255.1ContigJAWOKL000000000SAMN37852439
bin_147
GCA_037916955.1ContigJBAIWZ000000000SAMN38376939
bin_138
GCA_037916195.1ContigJBAIXX000000000SAMN38376963
bin_267
GCA_033853635.1ContigJAWOLI000000000SAMN37852462
bin_240
GCA_037916115.1ContigJBAIYF000000000SAMN38376971
bin_68
GCA_037916435.1ContigJBAIXW000000000SAMN38376962
bin_262
GCA_037916715.1ContigJBAIXI000000000SAMN38376948
bin_184
GCA_037915795.1ContigJBAIYP000000000SAMN38376981
bin_90
GCA_037915915.1ContigJBAIYL000000000SAMN38376977
bin_79
GCA_033852455.1ContigJAWOMN000000000SAMN37852493
bin_60
GCA_037916775.1ContigJBAIXG000000000SAMN38376946
bin_174
GCA_037917075.1ContigJBAIWV000000000SAMN38376935
bin_132
GCA_033852415.1ContigJAWOMQ000000000SAMN37852496
bin_71
GCA_033852675.1ContigJAWOMD000000000SAMN37852483
bin_321
GCA_033854295.1ContigJAWOKI000000000SAMN37852436
bin_139
GCA_033854175.1ContigJAWOKN000000000SAMN37852441
bin_159
GCA_033854075.1ContigJAWOKU000000000SAMN37852448
bin_172_1
GCA_033853615.1ContigJAWOLK000000000SAMN37852464
bin_262_1
GCA_033853575.1ContigJAWOLL000000000SAMN37852465
bin_262_2
GCA_037916615.1ContigJBAIXM000000000SAMN38376952
bin_216_1
GCA_033853145.1ContigJAWOLU000000000SAMN37852474
bin_298
GCA_037916665.1ContigJBAIXK000000000SAMN38376950
bin_204
GCA_037915855.1ContigJBAIYO000000000SAMN38376980
bin_89
GCA_037916075.1ContigJBAIYD000000000SAMN38376969
bin_60
GCA_037915775.1ContigJBAIYN000000000SAMN38376979
bin_82
GCA_037917205.1ContigJBAIWQ000000000SAMN38376930
bin_106
GCA_033852555.1ContigJAWOMJ000000000SAMN37852489
bin_41
GCA_033854495.1ContigJAWOJZ000000000SAMN37852427
bin_110
GCA_033854455.1ContigJAWOKD000000000SAMN37852431
bin_116
GCA_033852815.1ContigJAWOMB000000000SAMN37852481
bin_307
GCA_033852245.1ContigJAWOMX000000000SAMN37852503
bin_94
GCA_037916055.1ContigJBAIYG000000000SAMN38376972
bin_69
GCA_037916905.1ContigJBAIXB000000000SAMN38376941
bin_151
GCA_033852395.2ContigJAWOMR000000000SAMN37852497
bin_76
GCA_033852835.1ContigJAWOMC000000000SAMN37852482
bin_312
GCA_033853925.1ContigJAWOLC000000000SAMN37852456
bin_205
GCA_037917155.1ContigJBAIWU000000000SAMN38376934
bin_129
GCA_033854095.1ContigJAWOKW000000000SAMN37852450
bin_184_1
GCA_033853995.1ContigJAWOLA000000000SAMN37852454
bin_203
GCA_033853355.1ContigJAWOLP000000000SAMN37852469
bin_281
GCA_037916125.1ContigJBAIYE000000000SAMN38376970
bin_65
GCA_033853835.1ContigJAWOLD000000000SAMN37852457
bin_216
GCA_033853455.1ContigJAWOLM000000000SAMN37852466
bin_263
GCA_037916395.1ContigJBAIXS000000000SAMN38376958
bin_230
GCA_033852595.1ContigJAWOMG000000000SAMN37852486
bin_37
GCA_033852475.1ContigJAWOMM000000000SAMN37852492
bin_56
GCA_037916225.1ContigJBAIXZ000000000SAMN38376965
bin_285
GCA_037916275.1ContigJBAIYA000000000SAMN38376966
bin_40
GCA_037917175.1ContigJBAIWT000000000SAMN38376933
bin_124
GCA_037916975.1ContigJBAIWX000000000SAMN38376937
bin_136
GCA_033852635.1ContigJAWOMF000000000SAMN37852485
bin_36
GCA_033853695.1ContigJAWOLH000000000SAMN37852461
bin_24
GCA_033852235.1ContigJAWOMY000000000SAMN37852504
bin_96
GCA_037916345.1ContigJBAIXT000000000SAMN38376959
bin_247_1
GCA_033853335.1ContigJAWOLQ000000000SAMN37852470
bin_286
GCA_037915765.1ContigJBAIYQ000000000SAMN38376982
bin_93
GCA_033852915.1ContigJAWOLY000000000SAMN37852478
bin_301
GCA_037916685.1ContigJBAIXL000000000SAMN38376951
bin_209
GCA_037916335.1ContigJBAIXU000000000SAMN38376960
bin_247_2
GCA_033854155.1ContigJAWOKR000000000SAMN37852445
bin_166_1
GCA_037916855.1ContigJBAIXD000000000SAMN38376943
bin_16
GCA_033853555.1ContigJAWOLJ000000000SAMN37852463
bin_241
GCA_033852335.1ContigJAWOMU000000000SAMN37852500
bin_82_1
GCA_033852315.1ContigJAWOMV000000000SAMN37852501
bin_82_2
GCA_033853275.1ContigJAWOLR000000000SAMN37852471
bin_289_2
GCA_033852535.1ContigJAWOMK000000000SAMN37852490
bin_43
GCA_033854345.1ContigJAWOKG000000000SAMN37852434
bin_127
GCA_037916735.1ContigJBAIXH000000000SAMN38376947
bin_180
GCA_033852435.1ContigJAWOMO000000000SAMN37852494
bin_69_1
GCA_033854055.1ContigJAWOKT000000000SAMN37852447
bin_17
GCA_033854435.1ContigJAWOKC000000000SAMN37852430
bin_115_2
GCA_033854415.1ContigJAWOKB000000000SAMN37852429
bin_115_1
GCA_033854515.1ContigJAWOJY000000000SAMN37852426
bin_109_1
GCA_037916465.1ContigJBAIXR000000000SAMN38376957
bin_226
GCA_037916085.1ContigJBAIYC000000000SAMN38376968
bin_6
GCA_033854235.1ContigJAWOKM000000000SAMN37852440
bin_15
GCA_037916645.1ContigJBAIXJ000000000SAMN38376949
bin_2
GCA_037916815.1ContigJBAIXE000000000SAMN38376944
bin_165
GCA_037916375.1ContigJBAIXV000000000SAMN38376961
bin_258
GCA_033854395.1ContigJAWOKF000000000SAMN37852433
bin_122_2
GCA_033854375.1ContigJAWOKE000000000SAMN37852432
bin_122_1
GCA_037916515.1ContigJBAIXO000000000SAMN38376954
bin_22
GCA_033852295.1ContigJAWOMW000000000SAMN37852502
bin_91_1
GCA_037915935.1ContigJBAIYK000000000SAMN38376976
bin_74
GCA_033854335.1ContigJAWOKH000000000SAMN37852435
bin_128
GCA_037916835.1ContigJBAIXF000000000SAMN38376945
bin_170
GCA_033852375.1ContigJAWOMS000000000SAMN37852498
bin_78_1
GCA_033852355.1ContigJAWOMT000000000SAMN37852499
bin_78_2
GCA_033854035.1ContigJAWOKX000000000SAMN37852451
bin_185
GCA_037915945.1ContigJBAIYJ000000000SAMN38376975
bin_71_2
GCA_037915955.1ContigJBAIYI000000000SAMN38376974
bin_71_1
GCA_037916565.1ContigJBAIXN000000000SAMN38376953
bin_216_2
GCA_033853375.1ContigJAWOLO000000000SAMN37852468
bin_273
GCA_033853775.1ContigJAWOLG000000000SAMN37852460
bin_237_2
GCA_033853755.1ContigJAWOLF000000000SAMN37852459
bin_237_1
GCA_033853815.1ContigJAWOLE000000000SAMN37852458
bin_228
GCA_037916985.1ContigJBAIXA000000000SAMN38376940
bin_140
GCA_033853955.1ContigJAWOLB000000000SAMN37852455
bin_204
GCA_033853185.1ContigJAWOLT000000000SAMN37852473
bin_297
GCA_033852655.1ContigJAWOME000000000SAMN37852484
bin_325_1
GCA_033853975.1ContigJAWOKY000000000SAMN37852452
bin_2_1
GCA_033852615.1ContigJAWOMH000000000SAMN37852487
bin_38_1
GCA_033852575.1ContigJAWOMI000000000SAMN37852488
bin_38_2
GCA_037917035.1ContigJBAIWW000000000SAMN38376936
bin_133
GCA_037916865.1ContigJBAIXC000000000SAMN38376942
bin_154
GCA_037916495.1ContigJBAIXP000000000SAMN38376955
bin_222
GCA_037915925.1ContigJBAIYH000000000SAMN38376973
bin_70
GCA_037915785.1ContigJBAIYM000000000SAMN38376978
bin_8
GCA_033852445.2ContigJAWOMP000000000SAMN37852495
bin_7_1
GCA_033852515.1ContigJAWOML000000000SAMN37852491
bin_5_1
GCA_033852795.1ContigJAWOMA000000000SAMN37852480
bin_306_3
GCA_033853295.1ContigJAWOLS000000000SAMN37852472
bin_290_1
GCA_033853075.1ContigJAWOLV000000000SAMN37852475
bin_299
GCA_033853055.1ContigJAWOLW000000000SAMN37852476
bin_30_1
GCA_033852935.1ContigJAWOLX000000000SAMN37852477
bin_30_2
GCA_033852975.1ContigJAWOLZ000000000SAMN37852479
bin_306_1
GCA_033853915.1ContigJAWOKZ000000000SAMN37852453
bin_201_1
GCA_033853495.1ContigJAWOLN000000000SAMN37852467
bin_267
GCA_033854015.1ContigJAWOKV000000000SAMN37852449
bin_173
GCA_033854135.1ContigJAWOKQ000000000SAMN37852444
bin_163_3
GCA_033854115.1ContigJAWOKS000000000SAMN37852446
bin_168
GCA_033854315.1ContigJAWOKJ000000000SAMN37852437
bin_142
GCA_033854275.1ContigJAWOKK000000000SAMN37852438
bin_146
GCA_033854215.1ContigJAWOKP000000000SAMN37852443
bin_163_2
GCA_033854195.1ContigJAWOKO000000000SAMN37852442
bin_163_1
GCA_037916545.1ContigJBAIXQ000000000SAMN38376956
bin_223
GCA_037917125.1ContigJBAIWR000000000SAMN38376931
bin_110
GCA_037916205.1ContigJBAIXY000000000SAMN38376964
bin_279
GCA_037916995.1ContigJBAIWY000000000SAMN38376938
bin_137
GCA_037933065.1ContigJBAIWP0000000000SAMN38455708
-
GCA_037931745.1ContigJBAIWN0000000000SAMN38455671
-
GCA_037932095.1ContigJBAIWO0000000000SAMN38455700
-
GCA_037932185.1ContigJBAIWM0000000000SAMN38455690
-
GCA_036706575.1ContigJAXAXI0000000000SAMN38273187
Bulk_soil_metaG4
GCA_036705545.1ContigJAXAXH0000000000SAMN38273186
Bulk_soil_metaG3
GCA_036704725.1ContigJAXAXF0000000000SAMN37800812
Bulk_soil_metaG1
GCA_036704645.1ContigJAXAXG0000000000SAMN38273137
Bulk_soil_metaG2
SRA Data Details
ParameterValue
Data volume, Gbases801
Data volume, Tbytes0.26

Supplemental Content

Recent activity

    Your browsing activity is empty.

    Activity recording is turned off.

    Turn recording back on

    See more...
    Support Center