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Items: 18

1.

Lassa virus Josiah

Deep mutational scanning of the Lassa virus Josiah strain glycoprotein complex (GPC)

Taxonomy:
Lassa virus Josiah
Project data type: Raw sequence reads
Scope:
Synthetic
Fred Hutchinson Cancer Center
Accession:
PRJNA1071644
ID:
1071644
2.

Mammarenavirus lassaense

Genomic characterization of clinical Lassa virus isolates from 2017-2023 transmission seasons in Sierra Leone

Taxonomy:
Mammarenavirus lassaense
Project data type: Genome sequencing
Scope:
Multiisolate
Kenema Government Hospital, Viral hemorrhagic fever (VHF) Laborarory
Accession:
PRJNA962938
ID:
962938
3.

Mammarenavirus lassaense

Genomic characterization of clinical Lassa virus isolates from 2017-2023 transmission seasons in Sierra Leone

Taxonomy:
Mammarenavirus lassaense
Project data type: Metagenomic assembly
Scope:
Multiisolate
Kenema Government Hospital, Viral hemorrhagic fever (VHF) Laborarory
Accession:
PRJNA962841
ID:
962841
4.

Seli virus

Genome sequencing of Seli Virus and Lassa Virus in Sierra Leone

Project data type: Genome sequencing
Scope:
Multispecies
University of Glasgow
Accession:
PRJNA780418
ID:
780418
5.

Lassa Virus Genome Sequencing Nigeria

Project data type: Raw sequence reads
Scope:
Multispecies
African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Nigeria
Accession:
PRJNA666664
ID:
666664
6.

CAGE sequencing of LASV infected Vero Cells

Taxonomy:
Mammarenavirus lassaense
Project data type: Other
Scope:
Monoisolate
Ivan Marazzi, Microbiology, Icahn School of Medicine at Mount Sinai
Accession:
PRJNA623291
ID:
623291
7.

Different RNA Virus species

Metagenomic sequencing with spiked primer enrichment (MSSPE)

Project data type: Raw sequence reads
Scope:
Multispecies
NIH
Accession:
PRJNA578816
ID:
578816
8.

Mammarenavirus lassaense

Lassa mammarenavirus MinION Sequencing

Taxonomy:
Mammarenavirus lassaense
Project data type: Genome sequencing
Scope:
Multiisolate
Bernhard-Nocht-Institute for Tropical Medicine
Accession:
PRJNA482058
ID:
482058
9.

Mammarenavirus lassaense

Lassa Virus Sequencing

Taxonomy:
Mammarenavirus lassaense
Project data type: Genome sequencing
Scope:
Multiisolate
Bernhard-Nocht-Institute for Tropical Medicine
Accession:
PRJNA482054
ID:
482054
10.

Profiling the airway in the macaque model of tuberculosis reveals variable microbial dysbiosis and alteration of community structure

Project data type: Metagenome
Scope:
Multispecies
New York University
Accession:
PRJNA436553
ID:
436553
11.

Mammarenavirus lassaense

Lassa virus patient sequencing

Taxonomy:
Mammarenavirus lassaense
Project data type: Genome sequencing
Scope:
Multiisolate
Broad Institute of Harvard and MIT
Accession:
PRJNA436552
ID:
436552
12.

Mammarenavirus lassaense

Mammarenavirus lassaense Genome sequencing

Taxonomy:
Mammarenavirus lassaense
Project data type: Genome sequencing
Scope:
Multiisolate
United States Army Medical Research Institute of Infectious Diseases(USAMRIID)
Accession:
PRJNA428357
ID:
428357
13.

Genome sequence of LASV isolate Alzey

Genome sequence of Lassa virus isolated from the first domestically acquired case in Germany

Project data type: Genome sequencing
Scope:
Monoisolate
Institute for Medical Microbiology
Accession:
PRJEB14794
ID:
329069
14.

Filoviridae

Characterization of Filovirus Stocks

Project data type: Genome sequencing
Scope:
Multispecies
NIAID Integrated Research Facility
Accession:
PRJNA311755
ID:
311755
15.

Consortium for Microbial Forensics and Genomics (µFORGE): Capturing Global Biodiversity of Pathogens

Project data type: Genome sequencing and assembly
Scope:
Multispecies
µFORGE
Accession:
PRJNA257008
ID:
257008
16.

Mammarenavirus lassaense

Mammarenavirus lassaense Genome sequencing

Taxonomy:
Mammarenavirus lassaense
Project data type: Genome sequencing
Scope:
Multiisolate
Broad Institute of MIT and Harvard
Accession:
PRJNA254017
ID:
254017
17.

FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science

Project data type: Genome sequencing and assembly
Scope:
Multispecies
US Food and Drug Administration
Accession:
PRJNA231221
ID:
231221
18.

Mammarenavirus lassaense strain:Mopeia-Lassa 29

Assessing the variation of an attenuated Lassa vaccine after passage in vivo

Taxonomy:
Mammarenavirus lassaense
Project data type: Genome sequencing
Scope:
Multiisolate
University of Maryland Institute for Genome Sciences
Accession:
PRJNA73681
ID:
73681

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