txid9304[Organism:exp] - BioProject

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Select item 11021121.

Raw sequenece reads for target capture of immune and reproductive genes in Tasmanian devils

: Project data type: Raw sequence reads

Scope:: Multispecies

The University of Sydney

Accession:: PRJNA1102112
ID:: 1102112

Select item 11016852.

Raw sequences for MHC typing of Tasmanian devils

: Project data type: Raw sequence reads

Scope:: Multispecies

The University of Sydney

Accession:: PRJNA1101685
ID:: 1101685

Select item 11011913.

DArTseq raw sequence reads for Tasmanian devils

: Project data type: Raw sequence reads

Scope:: Multispecies

The University of Sydney

Accession:: PRJNA1101191
ID:: 1101191

Select item 9708484.

Sarcophilus harrisii isolate:DFT1 1426

Cathelicidin-treated Tasmanian devil facial tumour (DFT1) 1426 cells

Organism:: Sarcophilus harrisii

Taxonomy:: Sarcophilus harrisii (Tasmanian devil)

: Project data type: Raw sequence reads

Scope:: Multiisolate

The University of Sydney

Accession:: PRJNA970848
ID:: 970848

Select item 9572075.

The evolution of two transmissible cancers in Tasmanian devils (2023).

: Project data type: Other

Scope:: Monoisolate

Cambridge Department of Veterinary Medicine

Accession:: PRJEB51704
ID:: 957207

Select item 9532226.

Sarcophilus harrisii

marsupial transcriptome

Taxonomy:: Sarcophilus harrisii (Tasmanian devil)

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Center for the Evolutionary Origins of Human Behavior, Kyoto University

Accession:: PRJDB15651
ID:: 953222

Select item 8491687.

Principles of 3D chromosome folding and evolutionary genome reshuffling in mammals

: Project data type: Other

Scope:: Multispecies

Dept. Biologia Cel.lular, Fisiologia i Immunologia, Universitat Autonoma de Barcelona

Accession:: PRJNA849168
ID:: 849168

Select item 8025998.

Comparative analysis of genome-scale, base-resolution DNA methylation profiles across 580 animal species

: Project data type: Epigenomics

Scope:: Multispecies

CeMM Research Center for Molecular Medicine of the Austrian Academy of Sciences

Accession:: PRJNA802599
ID:: 802599

Select item 7945689.

Regulation of MHC-I and MHC-II expression by CIITA in transmissible devil facial tumour cells

Transcriptomic analysis of DFT1 and DFT2 cells with overexpression of CIITA

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY OF TASMANIA

Accession:: PRJEB45867
ID:: 794568

Select item 76778110.

Vetebrates

Germline mutation rate in vertebrates

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Copenhagen

Accession:: PRJNA767781
ID:: 767781

Select item 72420011.

NLRC5 regulates expression of MHC-I and functionally-related genes in devil facial tumour cells

RNA-sequencing of DFT cell lines treated with interferon-gamma (IFNG) or overexpressing NLRC5

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY OF TASMANIA

Accession:: PRJEB39847
ID:: 724200

Select item 71549612.

Tasmanian devil MHC typing

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Sydney

Accession:: PRJNA715496
ID:: 715496

Select item 71514213.

Mesenchymal plasticity of devil facial tumour cells during in vivo vaccine and immunotherapy trials

Serial biopsies from experimentally-induced devil facial tumour 1 (DFT1) in three Tasmanian devils were analysed by single-read RNA sequencing. Two of the Tasmanian devils were previously immunised, providing unique 'cases' that could be analysed to understand DFT1 growth under tumour-specific pressure from the immune system. Growth and regression of the DFT1 tumours analysed in this study was described in a previous study by Tover et al, 2017 (doi: 10.1038/srep43827)

: Project data type: Other

Scope:: Monoisolate

Menzies Institute for Medical Research, University of Tasmania

Accession:: PRJEB40422
ID:: 715142

Select item 69381814.

Sarcophilus harrisii

Sarcophilus harrisii and devil facial tumor disease Raw RNA-seq reads

Taxonomy:: Sarcophilus harrisii (Tasmanian devil)

: Project data type: Raw sequence reads

Scope:: Multiisolate

Washington State University

Accession:: PRJNA693818
ID:: 693818

Select item 69043415.

Australian marsupial phylogeny

Australian marsupial phylogeny with denovo assembly of target exons captured sequences.

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

AUSTRALIAN NATIONAL UNIVERSITY

Accession:: PRJEB39788
ID:: 690434

Select item 66742216.

Evolution_and_lineage_dynamics_of_a_transmissible_cancer_in_Tasmanian_devils___Targeted

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB40579
ID:: 667422

Select item 66741117.

Evolution_and_lineage_dynamics_of_a_transmissible_cancer_in_Tasmanian_devils

: Project data type: Other

Scope:: Monoisolate

Wellcome Sanger Institute

Accession:: PRJEB40407
ID:: 667411

Select item 64164818.

Sarcophilus harrisii

Sarcophilus harrisii and Devil facial tumor disease Raw sequence reads

Taxonomy:: Sarcophilus harrisii (Tasmanian devil)

: Project data type: Raw sequence reads

Scope:: Multiisolate

Washington State University

Accession:: PRJNA641648
ID:: 641648

Select item 63407119.

Sarcophilus harrisii

Sarcophilus harrisii Raw sequence reads

Taxonomy:: Sarcophilus harrisii (Tasmanian devil)

: Project data type: Raw sequence reads

Scope:: Multiisolate

Washington State University

Accession:: PRJNA634071
ID:: 634071

Select item 61373020.

A transmissible cancer shifts from emergence to endemism in Tasmanian devils

: Project data type: Raw sequence reads

Scope:: Multispecies

Washington State University

Accession:: PRJNA613730
ID:: 613730

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