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Accession: PRJEB13695 ID: 327057

P. pacificus diversity on la Reunion Island

Whole genome sequencing of nematode isolates from la Reunion islands

Whole genome sequencing of Pristionchus pacificus nematodes, isolates from la Reunion island sets up the startting point for detailed studies of genomic diversification and builds a framework for genome-wide association studies.
AccessionPRJEB13695; PUBMED: 27189551; PUBMED: 24443445; ENA-SUBMISSION: ERA609385
ScopeMonoisolate
Publications
  • McGaughran A et al., "Genomic Profiles of Diversification and Genotype-Phenotype Association in Island Nematode Lineages.", Mol Biol Evol, 2016 Sep;33(9):2257-72
  • Rödelsperger C et al., "Characterization of genetic diversity in the nematode Pristionchus pacificus from population-scale resequencing data.", Genetics, 2014 Apr;196(4):1153-65
SubmissionRegistration date: 28-Jun-2016
MAX PLANCK INSTITUTE FOR DEVELOPMENTAL BIOLOGY
Locus Tag PrefixBN5492
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments285
Publications
PubMed2
PMC1
Other datasets
BioSample275
SRA Data Details
ParameterValue
Data volume, Gbases879
Data volume, Tbytes0.60

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