See
Genome Information for Strongylocentrotus purpuratus
Navigate Up
Navigate Across
The Strongylocentrotus purpuratus genome has been sequenced using a combination of Sanger (~8X coverage), SOLiD (~18X), Illumina (~40x), and PacBio (~11X) by the Human Genome Sequencing Center at Baylor College of Medicine, using a combination of whole genome shotgun (WGS) and BAC-based sequencing.
| Accession | PRJNA10736 |
| Data Type | Genome sequencing and assembly |
| Scope | Monoisolate |
| Organism | Strongylocentrotus purpuratus[Taxonomy ID: 7668] Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus |
| Publications (total 4) Less... | - Sea Urchin Genome Sequencing Consortium et al., "The genome of the sea urchin Strongylocentrotus purpuratus.", Science, 2006 Nov 10;314(5801):941-52
- Valverde JR et al., "A conserved heptamer motif for ribosomal RNA transcription termination in animal mitochondria.", Proc Natl Acad Sci U S A, 1994 Jun 7;91(12):5368-71
- Qureshi SA et al., "Two distinct, sequence-specific DNA-binding proteins interact independently with the major replication pause region of sea urchin mtDNA.", Nucleic Acids Res, 1993 Jun 25;21(12):2801-8
- Jacobs HT et al., "Nucleotide sequence and gene organization of sea urchin mitochondrial DNA.", J Mol Biol, 1988 Jul 20;202(2):185-217
Less... |
| Submission | Registration date: 11-Mar-2005
Baylor College of Medicine |
| Related Resources | |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (WGS master) | 1 |
| SRA Experiments | 2600 |
| Capillary Traces (Trace Archive) | 1 |
| Publications |
| PubMed | 4 |
| PMC | 3 |
| Other datasets |
| BioSample | 3 |
| Assembly | 1 |
Related RefSeq Project
PRJNA13728 : RefSeq annotation of the Strongylocentrotus purpuratus reference genome sequence