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Accession: PRJNA140081 ID: 140081

Glycine max (soybean)

Genome-Wide Transcript Profiling During Soybean Seed Development and Throughout the Soybean Life Cycle

See Genome Information for Glycine max
We report the genome-wide transcriptome of soybean seeds across several stages of seed development and the entire life cycle using Illumina high-throughput sequencing technology. More...
AccessionPRJNA140081; GEO: GSE29163
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismGlycine max[Taxonomy ID: 3847]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja; Glycine max
Publications
  • Lin JY et al., "Similarity between soybean and Arabidopsis seed methylomes and loss of non-CG methylation does not affect seed development.", Proc Natl Acad Sci U S A, 2017 Nov 7;114(45):E9730-E9739
  • Danzer J et al., "Down-Regulating the Expression of 53 Soybean Transcription Factor Genes Uncovers a Role for SPEECHLESS in Initiating Stomatal Cell Lineages during Embryo Development.", Plant Physiol, 2015 Jul;168(3):1025-35
SubmissionRegistration date: 10-May-2011
Molecular, Cell and Developmental Biology, University of California, Los Angeles
RelevanceAgricultural
Project Data:
Resource NameNumber
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Sequence data
SRA Experiments12
Publications
PubMed2
PMC2
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases54
Data volume, Mbytes36347

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    Genome-Wide Transcript Profiling During Soybean Seed Development and Throughout the Soybean Life Cycle
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