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Accession: PRJNA205157 ID: 205157

ETS factors reprogram the androgen receptor cistrome and prime prostate tumorigenesis in response to PTEN loss

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA205157; GEO: GSE47220
TypeUmbrella project
PublicationsChen Y et al., "ETS factors reprogram the androgen receptor cistrome and prime prostate tumorigenesis in response to PTEN loss.", Nat Med, 2013 Aug;19(8):1023-9
SubmissionRegistration date: 23-May-2013
Chen, Human Oncology and Pathogenesis Program, Memorial Sloan Kettering Cancer Center
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments25
Publications
PubMed1
PMC1
Other datasets
BioSample25
GEO DataSets6
GEO Data Details
ParameterValue
Data volume, Spots1278737
Data volume, Processed Mbytes38
Data volume, Supplementary Mbytes19
SRA Data Details
ParameterValue
Data volume, Gbases83
Data volume, Mbytes55385
This project encompasses the following 5 sub-projects:
Project TypeNumber of Projects
Epigenomics2
BioProject
accession
OrganismTitle
PRJNA203679Homo sapiensEffect of ETV1 knockdown on genome wide AR binding in LNCaP Cells (Chen, Human Oncology and...)
PRJNA203677Mus musculusGenomic mapping of ERG, AR, histone H3 monomethyl-K4, histone H3 trimethyl-K4 binding sites in mouse prostates in WT, ERG overexpression, Pten loss mouse prostates (Chen, Human Oncology and...)
Transcriptome or Gene expression3
BioProject
accession
OrganismTitle
PRJNA202375Homo sapiensGene expression profile of ETV1 knockdown in LNCaP prostate cancer cells (Chen, Human Oncology and...)
PRJNA202377Mus musculusExpression profile of Pten loss and ERG overexpression in mouse prostate (Chen, Human Oncology and...)
PRJNA198808Mus musculusResponse to catration in PTEN null and PTEN null ERG expressing mouse prostates (Chen, Human Oncology and...)

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