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Accession: PRJNA315192 ID: 315192

Bacteria

Routine surveillance of E. coli and Shigella by Public Health England

See Genome Information for Escherichia coli
Routine surveillance of E. coli & Shigella by Public Health England
AccessionPRJNA315192
Data TypeGenome sequencing and assembly
ScopeMultispecies
PublicationsGreig DR et al., "Comparison of single-nucleotide variants identified by Illumina and Oxford Nanopore technologies in the context of a potential outbreak of Shiga toxin-producing Escherichia coli.", Gigascience, 2019 Aug 1;8(8)
SubmissionRegistration date: 7-Dec-2018
Health Protection Agency
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)27472
WGS master26536
Genomic DNA205
SRA Experiments32174
Protein Sequences307232
Publications
PubMed1
PMC1
Other datasets
BioSample32098
Assembly26647
SRA Data Details
ParameterValue
Data volume, Gbases13,987
Data volume, Tbytes6.17

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