Setaria italica strain:Yugu1 (ID 32913) - BioProject

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Accession: PRJNA32913 ID: 32913

Setaria italica strain:Yugu1 (foxtail millet)

See Genome Information for Setaria italica

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254 additional projects are related by organism.

Foxtail millet, Setaria italica, is a C4, inbreeding, panicoid crop with a small diploid genome (1C genome = 490 Mb). More...

Accession	PRJNA32913
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Setaria italica[Taxonomy ID: 4555] Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Cenchrinae; Setaria; Setaria italica
Publications	Bennetzen JL et al., "Reference genome sequence of the model plant Setaria.", Nat Biotechnol, 2012 May 13;30(6):555-61 Doust AN et al., "Foxtail millet: a sequence-driven grass model system.", Plant Physiol, 2009 Jan;149(1):137-41
Submission	Registration date: 11-May-2012 - JGI - JGI-PGF
Locus Tag Prefix	SETIT

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	337
WGS master	1
SRA Experiments	65
Capillary Traces (Trace Archive)	1
Protein Sequences	43001
Publications
PubMed	2
PMC	1
Other datasets
BioSample	4
Assembly	1

Assembly	Level	WGS	Chrs	BioSample	Taxonomy
GCA_000263155.2	Chromosome	AGNK00000000	9	SAMN02981383	Setaria italica

Parameter	Value
Data volume, Gbases	3
Data volume, Tbytes	0.11

Related RefSeq Project

PRJNA207554 : Setaria italica strain:Yugu1 RefSeq Genome