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Accession: PRJNA330783 ID: 330783

Dynamic and stable enhancer-promoter contacts regulate terminal differentiation

This SuperSeries is composed of the SubSeries listed below. Overall design: Refer to individual Series
AccessionPRJNA330783; GEO: GSE84662
TypeUmbrella project
PublicationsRubin AJ et al., "Lineage-specific dynamic and pre-established enhancer-promoter contacts cooperate in terminal differentiation.", Nat Genet, 2017 Oct;49(10):1522-1528
SubmissionRegistration date: 21-Jul-2016
Stanford University
RelevanceSuperseries
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments52
Publications
PubMed1
PMC1
Other datasets
BioSample52
GEO DataSets5
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes5957
SRA Data Details
ParameterValue
Data volume, Gbases489
Data volume, Tbytes0.29
Dynamic and stable enhancer-promoter contacts regulate terminal differentiation encompasses the following 4 sub-projects:
Project TypeNumber of Projects
Epigenomics1
BioProject
accession
OrganismTitle
PRJNA330779Homo sapiensDynamic and stable enhancer-promoter contacts regulate terminal differentiation [ChIP-Seq] (Stanford University)
Other2
BioProject
accession
OrganismTitle
PRJNA330782Homo sapiensDynamic and stable enhancer-promoter contacts regulate terminal differentiation [HiC_CHiC] (Stanford University)
PRJNA376091Homo sapiensDynamic and stable enhancer-promoter contacts regulate terminal differentiation [UMI-4C] (Stanford University)
Transcriptome or Gene expression1
BioProject
accession
OrganismTitle
PRJNA330788Homo sapiensDynamic and stable enhancer-promoter contacts regulate terminal differentiation [RNA-Seq] (Stanford University)

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