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Accession: PRJNA400143 ID: 400143

Staphylococcus aureus

Staphylococcus aureus epidemiology in paediatric hospital

See Genome Information for Staphylococcus aureus
In this study, we performed whole-genome sequencing of 184 Staphylococcus aureus isolates from 135 patients treated in different departments of an Italian paediatric hospital. More...
AccessionPRJNA400143
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismStaphylococcus aureus[Taxonomy ID: 1280]
Bacteria; Bacillota; Bacilli; Bacillales; Staphylococcaceae; Staphylococcus; Staphylococcus aureus
SubmissionRegistration date: 18-Jun-2018
University of Trento
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)10430
WGS master184
SRA Experiments184
Protein Sequences507514
Other datasets
BioSample184
Assembly184
Assembly details:
Assembly levelNumber of Assemblies
184
184
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_003236755.1ContigPZRR00000000SAMN08717780
CM179
GCA_003240395.1ContigPZYP00000000SAMN08717604
CM3
GCA_003240375.1ContigPZYK00000000SAMN08717613
CM12
GCA_003240345.1ContigPZYH00000000SAMN08717616
CM15
GCA_003240325.1ContigPZST00000000SAMN08717618
CM17
GCA_003240315.1ContigPZYG00000000SAMN08717617
CM16
GCA_003240295.1ContigPZYF00000000SAMN08717619
CM18
GCA_003240255.1ContigPZXZ00000000SAMN08717628
CM27
GCA_003240245.1ContigPZXY00000000SAMN08717629
CM28
GCA_003240235.1ContigPZXT00000000SAMN08717634
CM33
GCA_003240215.1ContigPZXS00000000SAMN08717636
CM35
GCA_003240185.1ContigPZXP00000000SAMN08717639
CM38
GCA_003240145.1ContigPZXK00000000SAMN08717644
CM43
GCA_003240175.1ContigPZXL00000000SAMN08717643
CM42
GCA_003240135.1ContigPZXH00000000SAMN08717647
CM46
GCA_003240095.1ContigPZXE00000000SAMN08717650
CM49
GCA_003240105.1ContigPZXG00000000SAMN08717648
CM47
GCA_003240075.1ContigPZXB00000000SAMN08717653
CM52
GCA_003240055.1ContigPZWY00000000SAMN08717656
CM55
GCA_003240035.1ContigPZWS00000000SAMN08717662
CM61
GCA_003240005.1ContigPZWR00000000SAMN08717663
CM62
GCA_003239995.1ContigPZWN00000000SAMN08717670
CM69
GCA_003239975.1ContigPZWM00000000SAMN08717671
CM70
GCA_003239915.1ContigPZWH00000000SAMN08717676
CM75
GCA_003239945.1ContigPZWL00000000SAMN08717672
CM71
GCA_003239925.1ContigPZWI00000000SAMN08717675
CM74
GCA_003239895.1ContigPZWG00000000SAMN08717677
CM76
GCA_003239855.1ContigPZWE00000000SAMN08717679
CM78
GCA_003239835.1ContigPZYL00000000SAMN08717612
CM11
GCA_003239845.1ContigPZYO00000000SAMN08717605
CM4
GCA_003239815.1ContigPZSK00000000SAMN08717681
CM80
GCA_003239755.1ContigPZYI00000000SAMN08717615
CM14
GCA_003239795.1ContigPZYM00000000SAMN08717611
CM10
GCA_003239735.1ContigPZYE00000000SAMN08717620
CM19
GCA_003239745.1ContigPZXD00000000SAMN08717651
CM50
GCA_003239715.1ContigPZXX00000000SAMN08717630
CM29
GCA_003239675.1ContigPZXU00000000SAMN08717633
CM32
GCA_003239615.1ContigPZWV00000000SAMN08717659
CM58
GCA_003239655.1ContigPZXC00000000SAMN08717652
CM51
GCA_003239685.1ContigPZXW00000000SAMN08717631
CM30
GCA_003239575.1ContigPZSO00000000SAMN08717667
CM66
GCA_003239625.1ContigPZWZ00000000SAMN08717655
CM54
GCA_003239585.1ContigPZWQ00000000SAMN08717664
CM63
GCA_003239555.1ContigPZSM00000000SAMN08717669
CM68
GCA_003239535.1ContigPZWJ00000000SAMN08717674
CM73
GCA_003239495.1ContigPZSI00000000SAMN08717688
CM87
GCA_003239505.1ContigPZWB00000000SAMN08717685
CM84
GCA_003239465.1ContigPZVS00000000SAMN08717696
CM95
GCA_003239455.1ContigPZVT00000000SAMN08717695
CM94
GCA_003239435.1ContigPZVQ00000000SAMN08717698
CM97
GCA_003239415.1ContigPZVP00000000SAMN08717699
CM98
GCA_003239365.1ContigPZVD00000000SAMN08717712
CM111
GCA_003239385.1ContigPZVH00000000SAMN08717708
CM107
GCA_003239355.1ContigPZVC00000000SAMN08717713
CM112
GCA_003239335.1ContigPZUY00000000SAMN08717717
CM116
GCA_003239315.1ContigPZUX00000000SAMN08717718
CM117
GCA_003239295.1ContigPZUV00000000SAMN08717720
CM119
GCA_003239255.1ContigPZRX00000000SAMN08717743
CM142
GCA_003239265.1ContigPZRZ00000000SAMN08717737
CM136
GCA_003239235.1ContigPZUB00000000SAMN08717750
CM149
GCA_003239215.1ContigPZUA00000000SAMN08717751
CM150
GCA_003239185.1ContigPZTY00000000SAMN08717753
CM152
GCA_003239175.1ContigPZTW00000000SAMN08717756
CM155
GCA_003239125.1ContigPZRQ00000000SAMN08717781
CM180
GCA_003239155.1ContigPZTD00000000SAMN08717778
CM177
GCA_003239095.1ContigPZSZ00000000SAMN08717602
CM1
GCA_003239105.1ContigPZRO00000000SAMN08717783
CM182
GCA_003239075.1ContigPZSY00000000SAMN08717603
CM2
GCA_003239055.1ContigPZSX00000000SAMN08717606
CM5
GCA_003239015.1ContigPZSW00000000SAMN08717608
CM7
GCA_003239025.1ContigPZYN00000000SAMN08717607
CM6
GCA_003238995.1ContigPZSV00000000SAMN08717609
CM8
GCA_003238965.1ContigPZSU00000000SAMN08717610
CM9
GCA_003238955.1ContigPZYJ00000000SAMN08717614
CM13
GCA_003238915.1ContigPZSR00000000SAMN08717622
CM21
GCA_003238925.1ContigPZSS00000000SAMN08717621
CM20
GCA_003238875.1ContigPZYC00000000SAMN08717624
CM23
GCA_003238885.1ContigPZYD00000000SAMN08717623
CM22
GCA_003238845.1ContigPZYB00000000SAMN08717625
CM24
GCA_003238835.1ContigPZSQ00000000SAMN08717626
CM25
GCA_003238805.1ContigPZYA00000000SAMN08717627
CM26
GCA_003238765.1ContigPZSP00000000SAMN08717635
CM34
GCA_003238775.1ContigPZXV00000000SAMN08717632
CM31
GCA_003238755.1ContigPZXR00000000SAMN08717637
CM36
GCA_003238735.1ContigPZXQ00000000SAMN08717638
CM37
GCA_003238675.1ContigPZXM00000000SAMN08717642
CM41
GCA_003238695.1ContigPZXO00000000SAMN08717640
CM39
GCA_003238685.1ContigPZXN00000000SAMN08717641
CM40
GCA_003238655.1ContigPZXJ00000000SAMN08717645
CM44
GCA_003238635.1ContigPZXI00000000SAMN08717646
CM45
GCA_003238605.1ContigPZXF00000000SAMN08717649
CM48
GCA_003238595.1ContigPZXA00000000SAMN08717654
CM53
GCA_003238575.1ContigPZWX00000000SAMN08717657
CM56
GCA_003238555.1ContigPZWW00000000SAMN08717658
CM57
GCA_003238515.1ContigPZWT00000000SAMN08717661
CM60
GCA_003238525.1ContigPZWU00000000SAMN08717660
CM59
GCA_003238485.1ContigPZWP00000000SAMN08717665
CM64
GCA_003238475.1ContigPZWO00000000SAMN08717666
CM65
GCA_003238455.1ContigPZSN00000000SAMN08717668
CM67
GCA_003238405.1ContigPZWF00000000SAMN08717678
CM77
GCA_003238395.1ContigPZSL00000000SAMN08717680
CM79
GCA_003238415.1ContigPZWK00000000SAMN08717673
CM72
GCA_003238375.1ContigPZWD00000000SAMN08717682
CM81
GCA_003238335.1ContigPZSH00000000SAMN08717691
CM90
GCA_003238345.1ContigPZVZ00000000SAMN08717687
CM86
GCA_003238315.1ContigPZVW00000000SAMN08717692
CM91
GCA_003238275.1ContigPZSG00000000SAMN08717706
CM105
GCA_003238245.1ContigPZVI00000000SAMN08717707
CM106
GCA_003238285.1ContigPZVR00000000SAMN08717697
CM96
GCA_003238235.1ContigPZVG00000000SAMN08717709
CM108
GCA_003238205.1ContigPZVE00000000SAMN08717711
CM110
GCA_003238195.1ContigPZUZ00000000SAMN08717716
CM115
GCA_003238165.1ContigPZUT00000000SAMN08717723
CM122
GCA_003238155.1ContigPZUS00000000SAMN08717724
CM123
GCA_003238105.1ContigPZSD00000000SAMN08717731
CM130
GCA_003238125.1ContigPZUR00000000SAMN08717725
CM124
GCA_003238085.1ContigPZSB00000000SAMN08717734
CM133
GCA_003238045.1ContigPZRY00000000SAMN08717738
CM137
GCA_003238075.1ContigPZUM00000000SAMN08717732
CM131
GCA_003238035.1ContigPZUJ00000000SAMN08717740
CM139
GCA_003237995.1ContigPZUH00000000SAMN08717742
CM141
GCA_003238015.1ContigPZUI00000000SAMN08717741
CM140
GCA_003237975.1ContigPZRW00000000SAMN08717749
CM148
GCA_003237945.1ContigPZTZ00000000SAMN08717752
CM151
GCA_003237935.1ContigPZTS00000000SAMN08717760
CM159
GCA_003237915.1ContigPZTM00000000SAMN08717766
CM165
GCA_003237895.1ContigPZTK00000000SAMN08717768
CM167
GCA_003237865.1ContigPZTG00000000SAMN08717772
CM171
GCA_003237855.1ContigPZRT00000000SAMN08717775
CM174
GCA_003237825.1ContigPZRP00000000SAMN08717782
CM181
GCA_003237815.1ContigPZTB00000000SAMN08717784
CM183
GCA_003237795.1ContigPZTA00000000SAMN08717785
CM184
GCA_003237775.1ContigPZSJ00000000SAMN08717683
CM82
GCA_003237755.1ContigPZWC00000000SAMN08717684
CM83
GCA_003237735.1ContigPZWA00000000SAMN08717686
CM85
GCA_003237705.1ContigPZVY00000000SAMN08717689
CM88
GCA_003237695.1ContigPZVX00000000SAMN08717690
CM89
GCA_003237675.1ContigPZVV00000000SAMN08717693
CM92
GCA_003237655.1ContigPZVU00000000SAMN08717694
CM93
GCA_003237615.1ContigPZVN00000000SAMN08717701
CM100
GCA_003237625.1ContigPZVO00000000SAMN08717700
CM99
GCA_003237595.1ContigPZVM00000000SAMN08717702
CM101
GCA_003237575.1ContigPZVL00000000SAMN08717703
CM102
GCA_003237535.1ContigPZVJ00000000SAMN08717705
CM104
GCA_003237545.1ContigPZVK00000000SAMN08717704
CM103
GCA_003237515.1ContigPZVF00000000SAMN08717710
CM109
GCA_003237495.1ContigPZVB00000000SAMN08717714
CM113
GCA_003237475.1ContigPZVA00000000SAMN08717715
CM114
GCA_003237435.1ContigPZSF00000000SAMN08717721
CM120
GCA_003237445.1ContigPZUW00000000SAMN08717719
CM118
GCA_003237415.1ContigPZUU00000000SAMN08717722
CM121
GCA_003237365.1ContigPZUQ00000000SAMN08717726
CM125
GCA_003237375.1ContigPZUP00000000SAMN08717727
CM126
GCA_003237355.1ContigPZUO00000000SAMN08717728
CM127
GCA_003237335.1ContigPZSE00000000SAMN08717729
CM128
GCA_003237305.1ContigPZSC00000000SAMN08717733
CM132
GCA_003237285.1ContigPZSA00000000SAMN08717735
CM134
GCA_003237275.1ContigPZUN00000000SAMN08717730
CM129
GCA_003237255.1ContigPZUL00000000SAMN08717736
CM135
GCA_003237215.1ContigPZUK00000000SAMN08717739
CM138
GCA_003237205.1ContigPZUG00000000SAMN08717744
CM143
GCA_003237195.1ContigPZUF00000000SAMN08717745
CM144
GCA_003237175.1ContigPZUE00000000SAMN08717746
CM145
GCA_003237145.1ContigPZUD00000000SAMN08717747
CM146
GCA_003237115.1ContigPZTX00000000SAMN08717754
CM153
GCA_003237125.1ContigPZUC00000000SAMN08717748
CM147
GCA_003237095.1ContigPZRV00000000SAMN08717755
CM154
GCA_003237035.1ContigPZTT00000000SAMN08717759
CM158
GCA_003237055.1ContigPZTV00000000SAMN08717757
CM156
GCA_003237045.1ContigPZTU00000000SAMN08717758
CM157
GCA_003236985.1ContigPZTQ00000000SAMN08717762
CM161
GCA_003237005.1ContigPZTR00000000SAMN08717761
CM160
GCA_003236975.1ContigPZTP00000000SAMN08717763
CM162
GCA_003236955.1ContigPZTO00000000SAMN08717764
CM163
GCA_003236935.1ContigPZTN00000000SAMN08717765
CM164
GCA_003236895.1ContigPZTJ00000000SAMN08717769
CM168
GCA_003236905.1ContigPZTL00000000SAMN08717767
CM166
GCA_003236875.1ContigPZTI00000000SAMN08717770
CM169
GCA_003236855.1ContigPZTH00000000SAMN08717771
CM170
GCA_003236805.1ContigPZRU00000000SAMN08717774
CM173
GCA_003236795.1ContigPZTE00000000SAMN08717776
CM175
GCA_003236825.1ContigPZTF00000000SAMN08717773
CM172
GCA_003236765.1ContigPZTC00000000SAMN08717779
CM178
GCA_003254765.1ContigPZRS00000000SAMN08717777
CM176
SRA Data Details
ParameterValue
Data volume, Gbases32
Data volume, Mbytes20246

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