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Accession: PRJNA673239 ID: 673239

PRO-seq, ATAC-seq, and Pol II ChIP-seq in 20 hour sea urchin embryos (ATAC-Seq) (purple sea urchin)

See Genome Information for Strongylocentrotus purpuratus
PRO-seq, ATAC-seq, and Pol II ChIP-seq signals are used to predict active developmental enhancers. More...
AccessionPRJNA673239; GEO: GSE160461
Data TypeEpigenomics
ScopeMultiisolate
OrganismStrongylocentrotus purpuratus[Taxonomy ID: 7668]
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus; Strongylocentrotus purpuratus
PublicationsArenas-Mena C et al., "Identification and prediction of developmental enhancers in sea urchin embryos.", BMC Genomics, 2021 Oct 19;22(1):751
SubmissionRegistration date: 29-Oct-2020
Biology, College of Staten Island
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments5
Publications
PubMed1
PMC1
Other datasets
BioSample5
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1113
SRA Data Details
ParameterValue
Data volume, Gbases53
Data volume, Mbytes20192

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