This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA784798; GEO: GSE189861 |
| Type | Umbrella project |
| Publications | Lee SD et al., "Integrative multi-omic analysis reveals neurodevelopmental gene dysregulation in CIC-knockout and IDH1-mutant cells.", J Pathol, 2022 Mar;256(3):297-309 |
| Submission | Registration date: 30-Nov-2021
Canada's Michael Smith Genome Sciences Centre |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 116 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 116 |
| GEO DataSets | 5 |
Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA784800 | Homo sapiens | Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [WGBS] (Canada's Michael Smith Genome...) | | PRJNA784802 | Homo sapiens | Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [cic_chip] (Canada's Michael Smith Genome...) | | PRJNA784803 | Homo sapiens | Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [histone_chip] (Canada's Michael Smith Genome...) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA784801 | Homo sapiens | Transcriptomic and Epigenomic Profiles of CIC-knockout and IDH1 mutant cells [RNA-seq] (Canada's Michael Smith Genome...) |
|