Pyrenophora tritici-repentis (ID 803191) - BioProject

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Accession: PRJNA803191 ID: 803191

Pyrenophora tritici-repentis

The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB

See Genome Information for Pyrenophora tritici-repentis

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6 additional projects are related by organism.

Genome assemblies used to construct the pangenome of Pyrenophora tritici-repentis.

Accession	PRJNA803191
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Pyrenophora tritici-repentis[Taxonomy ID: 45151] Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Dothideomycetes; Pleosporomycetidae; Pleosporales; Pleosporineae; Pleosporaceae; Pyrenophora; Pyrenophora tritici-repentis
Publications	Published online: Gourlie R et al., "The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB", BMC Biology, 2022;20(1)
Submission	Registration date: 3-Oct-2022 Agriculture and Agri-food Canada
Related Resources	Github
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	61
WGS master	40
Other datasets
BioSample	40
Assembly	40

Assembly details:

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Assembly level

Number of Assemblies

Chromosome

Contig

Total

2
38
40

Assembly	WGS	Chrs	BioSample	Infraspecies Id	Taxonomy
GCA_025557955.1	JAKRER000000000	11	SAMN25870380	I-73-1	Pyrenophora tritici-repentis
GCA_025558015.1	JAKRES000000000	10	SAMN25871520	D308	Pyrenophora tritici-repentis
GCA_025558035.1	JAMBXP000000000		SAMN26027283	I-34-1	Pyrenophora tritici-repentis
GCA_025557995.1	JAMBXO000000000		SAMN26027284	I-35-18	Pyrenophora tritici-repentis
GCA_025557965.1	JAMBXN000000000		SAMN26027285	T128-1	Pyrenophora tritici-repentis
GCA_025544575.1	JAMBYV000000000		SAMN26027251	L4-1	Pyrenophora tritici-repentis
GCA_025544555.1	JAMBYS000000000		SAMN26027254	SW21-1	Pyrenophora tritici-repentis
GCA_025544535.1	JAMBYT000000000		SAMN26027253	SW2-1	Pyrenophora tritici-repentis
GCA_025544515.1	JAMBYR000000000		SAMN26027255	SW21-7	Pyrenophora tritici-repentis
GCA_025544475.1	JAMBYP000000000		SAMN26027257	SW7-5	Pyrenophora tritici-repentis
GCA_025544595.1	JAMBYX000000000		SAMN26027249	I-33-1	Pyrenophora tritici-repentis
GCA_025544615.1	JAMBYW000000000		SAMN26027250	L3-1	Pyrenophora tritici-repentis
GCA_025544455.1	JAMBYQ000000000		SAMN26027256	SW21-8	Pyrenophora tritici-repentis
GCA_025544435.1	JAMBYO000000000		SAMN26027258	86-124	Pyrenophora tritici-repentis
GCA_025541315.1	JAMBYA000000000		SAMN26027272	92-171R5	Pyrenophora tritici-repentis
GCA_025544665.1	JAMBYU000000000		SAMN26027252	SW20-7	Pyrenophora tritici-repentis
GCA_025544635.1	JAMBYY000000000		SAMN26027248	ASC1	Pyrenophora tritici-repentis
GCA_025541685.1	JAMBYM000000000		SAMN26027260	L2-1	Pyrenophora tritici-repentis
GCA_025541595.1	JAMBYN000000000		SAMN26027259	AB88-2	Pyrenophora tritici-repentis
GCA_025541575.1	JAMBYL000000000		SAMN26027261	SW1-2	Pyrenophora tritici-repentis
GCA_025541555.1	JAMBYJ000000000		SAMN26027263	T132-2	Pyrenophora tritici-repentis
GCA_025541535.1	JAMBYI000000000		SAMN26027264	331-2	Pyrenophora tritici-repentis
GCA_025541515.1	JAMBYK000000000		SAMN26027262	SW15-1	Pyrenophora tritici-repentis
GCA_025541475.1	JAMBYG000000000		SAMN26027266	I-72-7	Pyrenophora tritici-repentis
GCA_025541495.1	JAMBYH000000000		SAMN26027265	I-72-1	Pyrenophora tritici-repentis
GCA_025541395.1	JAMBYC000000000		SAMN26027270	G9-4	Pyrenophora tritici-repentis
GCA_025541405.1	JAMBYF000000000		SAMN26027267	SC29-1	Pyrenophora tritici-repentis
GCA_025541425.1	JAMBYE000000000		SAMN26027268	SW21-5	Pyrenophora tritici-repentis
GCA_025541415.1	JAMBYD000000000		SAMN26027269	90-2	Pyrenophora tritici-repentis
GCA_025541335.1	JAMBXY000000000		SAMN26027274	Alg4x-1	Pyrenophora tritici-repentis
GCA_025541375.1	JAMBXZ000000000		SAMN26027273	Alg3-24	Pyrenophora tritici-repentis
GCA_025541355.1	JAMBYB000000000		SAMN26027271	T126-1	Pyrenophora tritici-repentis
GCA_025541095.1	JAMBXU000000000		SAMN26027278	I-36-1	Pyrenophora tritici-repentis
GCA_025541075.1	JAMBXX000000000		SAMN26027275	I-17-2	Pyrenophora tritici-repentis
GCA_025541055.1	JAMBXV000000000		SAMN26027277	I-35-56	Pyrenophora tritici-repentis
GCA_025536725.1	JAMBXT000000000		SAMN26027279	AlgH1	Pyrenophora tritici-repentis
GCA_025541035.1	JAMBXW000000000		SAMN26027276	I-34-5	Pyrenophora tritici-repentis
GCA_025536705.1	JAMBXR000000000		SAMN26027281	T176-2	Pyrenophora tritici-repentis
GCA_025536715.1	JAMBXS000000000		SAMN26027280	AZ35-5	Pyrenophora tritici-repentis
GCA_025536695.1	JAMBXQ000000000		SAMN26027282	T181-1	Pyrenophora tritici-repentis

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Pyrenophora tritici-repentis

The pangenome of the wheat pathogen Pyrenophora tritici-repentis reveals novel transposons associated with necrotrophic effectors ToxA and ToxB

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