This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA844323; GEO: GSE205293 |
| Type | Umbrella project |
| Publications | Lin D et al., "MGA-seq: robust identification of extrachromosomal DNA and genetic variants using multiple genetic abnormality sequencing.", Genome Biol, 2023 Oct 30;24(1):247 |
| Submission | Registration date: 1-Jun-2022
HZAU |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 17 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 17 |
| GEO DataSets | 5 |
MGA-seq is an efficient tool for genetic variants and extrachromosomal DNA detection in cancer cell encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
| Other | 3 |
BioProject
accession | Organism | Title |
|---|
| PRJNA844337 | Homo sapiens | MGA-seq is an efficient tool for genetic variants and extrachromosomal DNA detection in cancer cell [Nanopore] (HZAU) | | PRJNA844338 | Homo sapiens | MGA-seq is an efficient tool for genetic variants and extrachromosomal DNA detection in cancer cell [WGS] (HZAU) | | PRJNA844315 | Homo sapiens | MGA-seq is an efficient tool for genetic variants and extrachromosomal DNA detection in cancer cell [MGA-Seq] (HZAU) |
|
| Transcriptome or Gene expression | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA844316 | Homo sapiens | MGA-seq is an efficient tool for genetic variants and extrachromosomal DNA detection in cancer cell [RNA-Seq] (HZAU) |
|