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Accession: PRJNA325194 ID: 325194

Oryzias latipes strain:HSOK (Japanese medaka)

See Genome Information for Oryzias latipes
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157 additional projects are related by organism.
SMRT Sequencing (by PacBioRS) of Oryzias latipes strain HSOK
AccessionPRJNA325194
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismOryzias latipes[Taxonomy ID: 8090]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias; Oryzias latipes
PublicationsIchikawa K et al., "Centromere evolution and CpG methylation during vertebrate speciation.", Nat Commun, 2017 Nov 28;8(1):1833
SubmissionRegistration date: 12-Feb-2019
The University of Tokyo
RelevanceModel Organism
Locus Tag PrefixA9761
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)49
WGS master1
Genomic DNA24
SRA Experiments1
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly2
Assembly details:
Assembly levelNumber of Assemblies
Chromosome Chromosome
Total
2
2
SRA Data Details
ParameterValue
Data volume, Gbases112
Data volume, Tbytes0.42

Supplemental Content

Related information

LinkOut to external resources

  • GOLD: Gp0235760 [Genomes On Line Database]
    GOLD: Gp0235760
    Genomes On Line Database

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