ID 312960 - BioProject

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Links from BioProject

Accession: PRJNA312960 ID: 312960

200 Mammals

Navigate Up

This project is a component of the Earth BioGenome Project (EBP)

Navigate Across

36 additional projects are components of the Earth BioGenome Project (EBP).

Sequencing the genome of 200 mammals

Accession	PRJNA312960
Type	Umbrella project (Subtype:Disease)
Submission	Registration date: 23-Feb-2016 Broad Institute

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	131
SRA Experiments	136
Publications
PubMed	1
PMC	1
Other datasets
BioSample	139
Assembly	131

SRA Data Details

Parameter	Value
Data volume, Gbases	12,124
Data volume, Tbytes	7.45

This project encompasses the following 141 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

Scaffolds
SRA or Trace
No data links
Total

130
1
10
141

BioProject accession	Assembly level	Name	Title
PRJNA399339	Scaffolds	Acomys cahirinus	Acomys cahirinus isolate:US019 Genome sequencing and assembly (Broad Institute)
PRJNA412530	SRA or Trace	Acomys cahirinus	Acomys cahirinus Genome sequencing (Broad Institute)
PRJNA399372	Scaffolds	Alouatta palliata	Alouatta palliata isolate:BS02 Genome sequencing and assembly (Broad Institute)
PRJNA399350	Scaffolds	Anoura caudifer	Anoura caudifer isolate:US021 Genome sequencing and assembly (Broad Institute)
PRJNA399373	Scaffolds	Antilocapra americana	Antilocapra americana isolate:BS35 Genome sequencing and assembly (Broad Institute)

List all 141 'Genome sequencing' projects...

BioProject accession	Assembly level	Name	Title
PRJNA399339	Scaffolds	Acomys cahirinus	Acomys cahirinus isolate:US019 Genome sequencing and assembly (Broad Institute)
PRJNA412530	SRA or Trace	Acomys cahirinus	Acomys cahirinus Genome sequencing (Broad Institute)
PRJNA399372	Scaffolds	Alouatta palliata	Alouatta palliata isolate:BS02 Genome sequencing and assembly (Broad Institute)
PRJNA399350	Scaffolds	Anoura caudifer	Anoura caudifer isolate:US021 Genome sequencing and assembly (Broad Institute)
PRJNA399373	Scaffolds	Antilocapra americana	Antilocapra americana isolate:BS35 Genome sequencing and assembly (Broad Institute)
PRJNA399351	Scaffolds	Antrozous pallidus	Antrozous pallidus isolate:US032 Genome sequencing and assembly (Broad Institute)
PRJNA728710	No data links	Antrozous pallidus isolate:US032 Genome sequencing and assembly	Antrozous pallidus isolate:US032 Genome sequencing and assembly (Zoonomia)
PRJNA399342	Scaffolds	Aplodontia rufa	Aplodontia rufa isolate:BS102 Genome sequencing and assembly (Broad Institute)
PRJNA399471	Scaffolds	Artibeus jamaicensis	Artibeus jamaicensis isolate:US092 Genome sequencing and assembly (Broad Institute)
PRJNA399374	Scaffolds	Ateles geoffroyi	Ateles geoffroyi isolate:BS17 Genome sequencing and assembly (Broad Institute)
PRJNA729101	No data links	Ateles geoffroyi isolate:BS17 Genome sequencing and assembly	Ateles geoffroyi isolate:BS17 Genome sequencing and assembly (Zoonomia)
PRJNA399375	Scaffolds	Beatragus hunteri	Beatragus hunteri isolate:BS46 Genome sequencing and assembly (Broad Institute)
PRJNA399370	Scaffolds	Bradypus variegatus	Bradypus variegatus isolate:BS16 Genome sequencing and assembly (Broad Institute)
PRJNA399441	Scaffolds	Canis lupus familiaris	Canis lupus familiaris isolate:BS72 Genome sequencing and assembly (Broad Institute)
PRJNA399377	Scaffolds	Capromys pilorides	Capromys pilorides isolate:US015 Genome sequencing and assembly (Broad Institute)
PRJNA399426	No data links	Carlito syrichta	Carlito syrichta Genome sequencing (Broad Institute)
PRJNA399439	Scaffolds	Carollia perspicillata	Carollia perspicillata isolate:US073 Genome sequencing and assembly (Broad Institute)
PRJNA399431	Scaffolds	Castor canadensis	Castor canadensis isolate:US014 Genome sequencing and assembly (Broad Institute)
PRJNA399378	Scaffolds	Catagonus wagneri	Catagonus wagneri isolate:BS18 Genome sequencing and assembly (Broad Institute)
PRJNA399343	Scaffolds	Cavia tschudii	Cavia tschudii isolate:US050 Genome sequencing and assembly (Broad Institute)
PRJNA399379	Scaffolds	Cebus albifrons	Cebus albifrons isolate:BS31 Genome sequencing and assembly (Broad Institute)
PRJNA399457	Scaffolds	Ceratotherium simum cottoni	Ceratotherium simum cottoni isolate:BS59 Genome sequencing and assembly (Broad Institute)
PRJNA399380	Scaffolds	Cercopithecus neglectus	Cercopithecus neglectus isolate:BS29 Genome sequencing and assembly (Broad Institute)
PRJNA399381	Scaffolds	Chaetophractus vellerosus	Chaetophractus vellerosus isolate:US068 Genome sequencing and assembly (Broad Institute)
PRJNA399382	Scaffolds	Cheirogaleus medius	Cheirogaleus medius isolate:BS12 Genome sequencing and assembly (Broad Institute)
PRJNA399383	Scaffolds	Choloepus didactylus	Choloepus didactylus isolate:US054 Genome sequencing and assembly (Broad Institute)
PRJNA399474	Scaffolds	Chrysochloris asiatica	Chrysochloris asiatica isolate:BS56 Genome sequencing and assembly (Broad Institute)
PRJNA399445	Scaffolds	Craseonycteris thonglongyai	Craseonycteris thonglongyai isolate:US097 Genome sequencing and assembly (Broad Institute)
PRJNA399436	Scaffolds	Cricetomys gambianus	Cricetomys gambianus isolate:US082 Genome sequencing and assembly (Broad Institute)
PRJNA399360	Scaffolds	Crocidura indochinensis	Crocidura indochinensis isolate:US011 Genome sequencing and assembly (Broad Institute)
PRJNA399384	Scaffolds	Cryptoprocta ferox	Cryptoprocta ferox isolate:BS36 Genome sequencing and assembly (Broad Institute)
PRJNA399344	Scaffolds	Ctenodactylus gundi	Ctenodactylus gundi isolate:US049 Genome sequencing and assembly (Broad Institute)
PRJNA399368	Scaffolds	Ctenomys sociabilis	Ctenomys sociabilis isolate:BS34 Genome sequencing and assembly (Broad Institute)
PRJNA399385	Scaffolds	Cuniculus paca	Cuniculus paca isolate:BS43 Genome sequencing and assembly (Broad Institute)
PRJNA399449	No data links	Dactylomys boliviensis	Dactylomys boliviensis Genome sequencing (Broad Institute)
PRJNA399386	Scaffolds	Dasyprocta punctata	Dasyprocta punctata isolate:BS37 Genome sequencing and assembly (Broad Institute)
PRJNA399387	Scaffolds	Daubentonia madagascariensis	Daubentonia madagascariensis isolate:BS11 Genome sequencing and assembly (Broad Institute)
PRJNA399388	Scaffolds	Diceros bicornis	Diceros bicornis isolate:BS38 Genome sequencing and assembly (Broad Institute)
PRJNA399389	Scaffolds	Dinomys branickii	Dinomys branickii isolate:US070 Genome sequencing and assembly (Broad Institute)
PRJNA399390	Scaffolds	Dipodomys stephensi	Dipodomys stephensi isolate:BS19 Genome sequencing and assembly (Broad Institute)
PRJNA399391	Scaffolds	Dolichotis patagonum	Dolichotis patagonum isolate:US062 Genome sequencing and assembly (Broad Institute)
PRJNA399475	Scaffolds	Elephantulus edwardii	Elephantulus edwardii isolate:BS57 Genome sequencing and assembly (Broad Institute)
PRJNA399392	Scaffolds	Erythrocebus patas	Erythrocebus patas isolate:BS28 Genome sequencing and assembly (Broad Institute)
PRJNA399463	Scaffolds	Eschrichtius robustus	Eschrichtius robustus isolate:BS60 Genome sequencing and assembly (Broad Institute)
PRJNA399464	Scaffolds	Eubalaena japonica	Eubalaena japonica isolate:BS61 Genome sequencing and assembly (Broad Institute)
PRJNA399393	Scaffolds	Eulemur fulvus	Eulemur fulvus isolate:BS10 Genome sequencing and assembly (Broad Institute)
PRJNA399394	Scaffolds	Felis nigripes	Felis nigripes isolate:BS47 Genome sequencing and assembly (Broad Institute)
PRJNA399345	Scaffolds	Galeopterus variegatus	Galeopterus variegatus isolate:US047 Genome sequencing and assembly (Broad Institute)
PRJNA399435	Scaffolds	Glis glis	Glis glis isolate:US078 Genome sequencing and assembly (Broad Institute)
PRJNA399395	Scaffolds	Graphiurus murinus	Graphiurus murinus isolate:US067 Genome sequencing and assembly (Broad Institute)
PRJNA399396	Scaffolds	Helogale parvula	Helogale parvula isolate:US077 Genome sequencing and assembly (Broad Institute)
PRJNA399397	Scaffolds	Hemitragus hylocrius	Hemitragus hylocrius isolate:BS50 Genome sequencing and assembly (Broad Institute)
PRJNA399398	Scaffolds	Heterohyrax brucei	Heterohyrax brucei isolate:US064 Genome sequencing and assembly (Broad Institute)
PRJNA399399	Scaffolds	Hippopotamus amphibius	Hippopotamus amphibius isolate:BS01 Genome sequencing and assembly (Broad Institute)
PRJNA399442	Scaffolds	Hipposideros galeritus	Hipposideros galeritus isolate:US101 Genome sequencing and assembly (Broad Institute)
PRJNA399453	No data links	Hoplomys gymnurus	Hoplomys gymnurus Genome sequencing (Broad Institute)
PRJNA399363	Scaffolds	Hyaena hyaena	Hyaena hyaena isolate:BS54 Genome sequencing and assembly (Broad Institute)
PRJNA399400	Scaffolds	Hydrochoerus hydrochaeris	Hydrochoerus hydrochaeris isolate:US065 Genome sequencing and assembly (Broad Institute)
PRJNA399401	Scaffolds	Hystrix cristata	Hystrix cristata isolate:US031 Genome sequencing and assembly (Broad Institute)
PRJNA399458	Scaffolds	Indri indri	Indri indri isolate:BS62 Genome sequencing and assembly (Broad Institute)
PRJNA399465	Scaffolds	Inia geoffrensis	Inia geoffrensis isolate:BS63 Genome sequencing and assembly (Broad Institute)
PRJNA399466	Scaffolds	Kogia breviceps	Kogia breviceps isolate:BS64 Genome sequencing and assembly (Broad Institute)
PRJNA399352	Scaffolds	Lasiurus borealis	Lasiurus borealis isolate:US024 Genome sequencing and assembly (Broad Institute)
PRJNA399402	Scaffolds	Lemur catta	Lemur catta isolate:BS26 Genome sequencing and assembly (Broad Institute)
PRJNA399359	Scaffolds	Lepus americanus	Lepus americanus isolate:BS55 Genome sequencing and assembly (Broad Institute)
PRJNA399443	Scaffolds	Macroglossus sobrinus	Macroglossus sobrinus isolate:US102 Genome sequencing and assembly (Broad Institute)
PRJNA399440	Scaffolds	Macrotus californicus	Macrotus californicus isolate:US035 Genome sequencing and assembly (Broad Institute)
PRJNA399448	No data links	Mallomys	Mallomys Genome sequencing (Broad Institute)
PRJNA399353	Scaffolds	Megaderma lyra	Megaderma lyra isolate:US036 Genome sequencing and assembly (Broad Institute)
PRJNA399403	Scaffolds	Mellivora capensis	Mellivora capensis isolate:BS25 Genome sequencing and assembly (Broad Institute)
PRJNA399432	Scaffolds	Meriones unguiculatus	Meriones unguiculatus isolate:US013 Genome sequencing and assembly (Broad Institute)
PRJNA399476	Scaffolds	Mesoplodon bidens	Mesoplodon bidens isolate:US080 Genome sequencing and assembly (Broad Institute)
PRJNA399354	Scaffolds	Micronycteris hirsuta	Micronycteris hirsuta isolate:US037 Genome sequencing and assembly (Broad Institute)
PRJNA399366	Scaffolds	Miniopterus schreibersii	Miniopterus schreibersii isolate:US075 Genome sequencing and assembly (Broad Institute)
PRJNA399341	Scaffolds	Mirounga angustirostris	Mirounga angustirostris isolate:BS05 Genome sequencing and assembly (Broad Institute)
PRJNA399404	Scaffolds	Mirza coquereli	Mirza coquereli isolate:BS13 Genome sequencing and assembly (Broad Institute)
PRJNA399349	Scaffolds	Monodon monoceros	Monodon monoceros Genome sequencing and assembly (Broad Institute)
PRJNA399472	Scaffolds	Mormoops blainvillei	Mormoops blainvillei isolate:US096 Genome sequencing and assembly (Broad Institute)
PRJNA399405	Scaffolds	Moschus moschiferus	Moschus moschiferus isolate:BS20 Genome sequencing and assembly (Broad Institute)
PRJNA399406	Scaffolds	Mungos mungo	Mungos mungo isolate:US063 Genome sequencing and assembly (Broad Institute)
PRJNA399367	Scaffolds	Murina aurata feae	Murina aurata feae isolate:US074 Genome sequencing and assembly (Broad Institute)
PRJNA399340	Scaffolds	Muscardinus avellanarius	Muscardinus avellanarius isolate:US077 Genome sequencing and assembly (Broad Institute)
PRJNA399346	Scaffolds	Myocastor coypus	Myocastor coypus isolate:US051 Genome sequencing and assembly (Broad Institute)
PRJNA399444	Scaffolds	Myotis myotis	Myotis myotis isolate:US100 Genome sequencing and assembly (Broad Institute)
PRJNA399407	Scaffolds	Myrmecophaga tridactyla	Myrmecophaga tridactyla isolate:BS39 Genome sequencing and assembly (Broad Institute)
PRJNA399408	Scaffolds	Nasalis larvatus	Nasalis larvatus isolate:BS101 Genome sequencing and assembly (Broad Institute)
PRJNA399438	No data links	Neotoma lepida	Neotoma lepida Genome sequencing (Broad Institute)
PRJNA399450	Scaffolds	Nesogale talazaci	Nesogale talazaci isolate:US118 Genome sequencing and assembly (Broad Institute)
PRJNA399473	Scaffolds	Noctilio leporinus	Noctilio leporinus isolate:US093 Genome sequencing and assembly (Broad Institute)
PRJNA399409	Scaffolds	Nycticebus coucang	Nycticebus coucang isolate:BS32 Genome sequencing and assembly (Broad Institute)
PRJNA399355	Scaffolds	Nycticeius humeralis	Nycticeius humeralis isolate:US023 Genome sequencing and assembly (Broad Institute)
PRJNA399451	Scaffolds	Ondatra zibethicus	Ondatra zibethicus isolate:US110 Genome sequencing and assembly (Broad Institute)
PRJNA399348	Scaffolds	Onychomys torridus	Onychomys torridus isolate:US017 Genome sequencing and assembly (Broad Institute)
PRJNA399447	Scaffolds	Orientallactaga bullata	Orientallactaga bullata isolate:US110 Genome sequencing and assembly (Broad Institute)
PRJNA399461	Scaffolds	Orycteropus afer	Orycteropus afer isolate:BS58 Genome sequencing and assembly (Broad Institute)
PRJNA399410	Scaffolds	Ovis canadensis	Ovis canadensis isolate:BS48 Genome sequencing and assembly (Broad Institute)
PRJNA399411	Scaffolds	Panthera onca	Panthera onca isolate:BS21 Genome sequencing and assembly (Broad Institute)
PRJNA399364	Scaffolds	Paradoxurus hermaphroditus	Paradoxurus hermaphroditus isolate:BSD07 Genome sequencing and assembly (Broad Institute)
PRJNA399412	Scaffolds	Pedetes capensis	Pedetes capensis isolate:US022 Genome sequencing and assembly (Broad Institute)
PRJNA399459	Scaffolds	Perognathus longimembris pacificus	Perognathus longimembris pacificus isolate:BS65 Genome sequencing and assembly (Broad Institute)
PRJNA399347	Scaffolds	Petromus typicus	Petromus typicus isolate:US052 Genome sequencing and assembly (Broad Institute)
PRJNA399460	Scaffolds	Phataginus tricuspis	Phataginus tricuspis isolate:BS60 Genome sequencing and assembly (Broad Institute)
PRJNA399454	Scaffolds	Phocoena phocoena	Phocoena phocoena isolate:BS71 Genome sequencing and assembly (Broad Institute)
PRJNA399427	Scaffolds	Pipistrellus pipistrellus	Pipistrellus pipistrellus isolate:US040 Genome sequencing and assembly (Broad Institute)
PRJNA399413	Scaffolds	Pithecia pithecia	Pithecia pithecia isolate:BS33 Genome sequencing and assembly (Broad Institute)
PRJNA399467	Scaffolds	Platanista minor	Platanista minor isolate:BS66 Genome sequencing and assembly (Broad Institute)
PRJNA399376	Scaffolds	Plecturocebus donacophilus	Plecturocebus donacophilus isolate:BS44 Genome sequencing and assembly (Broad Institute)
PRJNA399468	Scaffolds	Pontoporia blainvillei	Pontoporia blainvillei isolate:BS67 Genome sequencing and assembly (Broad Institute)
PRJNA399414	Scaffolds	Procavia capensis	Procavia capensis isolate:US060 Genome sequencing and assembly (Broad Institute)
PRJNA399365	Scaffolds	Pteronura brasiliensis	Pteronura brasiliensis isolate:BS51 Genome sequencing and assembly (Broad Institute)
PRJNA399415	Scaffolds	Pygathrix nemaeus	Pygathrix nemaeus isolate:BS24 Genome sequencing and assembly (Broad Institute)
PRJNA399416	Scaffolds	Rangifer tarandus	Rangifer tarandus isolate:US061 Genome sequencing and assembly (Broad Institute)
PRJNA399358	No data links	Rhabdomys pumilio	Rhabdomys pumilio Genome sequencing (Broad Institute)
PRJNA399429	Scaffolds	Rhinolophus ferrumequinum	Rhinolophus ferrumequinum isolate:US033 Genome sequencing and assembly (Broad Institute)
PRJNA399452	Scaffolds	Rhizomys pruinosus	Rhizomys pruinosus isolate:US103 Genome sequencing and assembly (Broad Institute)
PRJNA399428	Scaffolds	Rousettus aegyptiacus	Rousettus aegyptiacus isolate:US006 Genome sequencing and assembly (Broad Institute)
PRJNA399417	Scaffolds	Saguinus imperator	Saguinus imperator isolate:BS22 Genome sequencing and assembly (Broad Institute)
PRJNA399418	Scaffolds	Saiga tatarica	Saiga tatarica isolate:BS49 Genome sequencing and assembly (Broad Institute)
PRJNA399361	Scaffolds	Scalopus aquaticus	Scalopus aquaticus isolate:US009 Genome sequencing and assembly (Broad Institute)
PRJNA399419	Scaffolds	Semnopithecus entellus	Semnopithecus entellus isolate:BS30 Genome sequencing and assembly (Broad Institute)
PRJNA399433	Scaffolds	Sigmodon hispidus	Sigmodon hispidus isolate:US029 Genome sequencing and assembly (Broad Institute)
PRJNA399371	Scaffolds	Solenodon paradoxus	Solenodon paradoxus isolate:US097 Genome sequencing and assembly (Broad Institute)
PRJNA399437	Scaffolds	Spilogale gracilis	Spilogale gracilis isolate:US072 Genome sequencing and assembly (Broad Institute)
PRJNA399357	Scaffolds	Suricata suricatta	Suricata suricatta isolate:BS45 Genome sequencing and assembly (Broad Institute)
PRJNA399430	Scaffolds	Tadarida brasiliensis	Tadarida brasiliensis isolate:US034 Genome sequencing and assembly (Broad Institute)
PRJNA399420	Scaffolds	Tamandua tetradactyla	Tamandua tetradactyla isolate:US055 Genome sequencing and assembly (Broad Institute)
PRJNA399446	No data links	Tamias amoenus	Tamias amoenus Genome sequencing (Broad Institute)
PRJNA399421	Scaffolds	Tapirus indicus	Tapirus indicus isolate:BS100 Genome sequencing and assembly (Broad Institute)
PRJNA399422	Scaffolds	Tapirus terrestris	Tapirus terrestris isolate:BS40 Genome sequencing and assembly (Broad Institute)
PRJNA399455	No data links	Thomomys bottae	Thomomys bottae Genome sequencing (Broad Institute)
PRJNA399470	Scaffolds	Thryonomys swinderianus	Thryonomys swinderianus isolate:US090 Genome sequencing and assembly (Broad Institute)
PRJNA399423	Scaffolds	Tolypeutes matacus	Tolypeutes matacus isolate:US073 Genome sequencing and assembly (Broad Institute)
PRJNA399356	Scaffolds	Tonatia saurophila	Tonatia saurophila isolate:US038 Genome sequencing and assembly (Broad Institute)
PRJNA399456	Scaffolds	Tragulus javanicus	Tragulus javanicus isolate:US108 Genome sequencing and assembly (Broad Institute)
PRJNA399462	Scaffolds	Tupaia tana	Tupaia tana isolate:BS70 Genome sequencing and assembly (Broad Institute)
PRJNA399362	Scaffolds	Uropsilus gracilis	Uropsilus gracilis isolate:US010 Genome sequencing and assembly (Broad Institute)
PRJNA399424	Scaffolds	Vulpes lagopus	Vulpes lagopus isolate:US066 Genome sequencing and assembly (Broad Institute)
PRJNA399425	Scaffolds	Xerus inauris	Xerus inauris isolate:US057 Genome sequencing and assembly (Broad Institute)
PRJNA399369	Scaffolds	Zalophus californianus	Zalophus californianus isolate:BS06 Genome sequencing and assembly (Broad Institute)
PRJNA399434	Scaffolds	Zapus hudsonius	Zapus hudsonius isolate:BS14 Genome sequencing and assembly (Broad Institute)
PRJNA399469	Scaffolds	Ziphius cavirostris	Ziphius cavirostris isolate:BS68 Genome sequencing and assembly (Broad Institute)

Less...

BioProject

Result Filters

Display Settings:

Send to:

Links from BioProject

200 Mammals

Supplemental Content

Related information

Recent activity