See
Genome Information for Homo sapiens
PacBio Circular Consensus Sequencing (CCS) of the human male HG002/NA24385 to evaluate the ability of highly-accurate long-read sequencing to identify small and large variants, to phase variants into haplotypes, and to assemble a genome de novo.
| Accession | PRJNA529679 |
| Type | Umbrella project |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications | Wenger AM et al., "Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome.", Nat Biotechnol, 2019 Oct;37(10):1155-1162 |
| Submission | Registration date: 28-Mar-2019
Pacific Biosciences |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (WGS master) | 2 |
| SRA Experiments | 1 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Variation (dbVar) | 30219 |
| Assembly | 2 |
This project encompasses the following 3 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Contigs |
2
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA529552 | Contigs | Homo sapiens | Highly-accurate long-read sequencing of HG002/NA24385 - De Novo Assembly (paternal) (Pacific Biosciences) | | PRJNA529551 | Contigs | Homo sapiens | Highly-accurate long-read sequencing of HG002/NA24385 - De Novo Assembly (maternal) (Pacific Biosciences) |
|
| Variation | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA520771 | Homo sapiens | Highly-accurate long-read sequencing of HG002/NA24385 (Pacific Biosciences) |
|