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Genome Information for Rattus norvegicus
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This project provides the genome assembly of Rattus norvegicus, common name Norway rat, based on the sample mRatNor1 provided by Melinda Dwinell/Mary Shimoyama.
| Accession | PRJNA662962 |
| Type | Umbrella project |
| Organism | Rattus norvegicus[Taxonomy ID: 10116] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus; Rattus norvegicus |
| Submission | Registration date: 11-Sep-2020
|
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 63 |
| WGS master | 2 |
| SRA Experiments | 12 |
| Other datasets |
| BioSample | 2 |
| Assembly | 2 |
mRatBN7 encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds No data links Total |
1
1
1
3
|
BioProject
accession | Assembly
level | Organism | Title |
|---|
| PRJNA662791 | Chromosomes | Rattus norvegicus | Rattus norvegicus (Norway rat) principal haplotype genome assembly, mRatBN7 (Wellcome Sanger Institute) | | PRJNA663241 | Scaffolds | Rattus norvegicus | Rattus norvegicus (Norway rat) genome assembly, mRatBN7, alternate haplotype (Wellcome Sanger Institute) | | PRJNA677964 | No data links | Rattus norvegicus | Rattus norvegicus strain:BN/NHsdMcwi RefSeq Genome sequencing and assembly (NCBI) |
|
| Other | 1 |
BioProject
accession | Name | Title |
|---|
| PRJEB43118 | Rattus norvegicus mRatNor1 raw sequence reads | Rattus norvegicus strain:BN/NHsdMcwi | isolate:mRatNor1 (Norway rat) (Wellcome Sanger Institute) |
|