This SuperSeries is composed of the SubSeries listed below.
Overall design: Refer to individual Series
| Accession | PRJNA825721; GEO: GSE200656 |
| Type | Umbrella project |
| Publications | - Engelhard CA et al., "Nanopore sequencing unveils the complexity of the cold-activated murine brown adipose tissue transcriptome.", iScience, 2023 Aug 18;26(8):107190
- Engelhard CA et al., "Comprehensive Transcriptional Profiling and Mouse Phenotyping Reveals Dispensable Role for Adipose Tissue Selective Long Noncoding RNA Gm15551.", Noncoding RNA, 2022 May 6;8(3)
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| Submission | Registration date: 12-Apr-2022
Noncoding Kornfeld Lab - Principles of Energy Homeostasis, Biochemistry and Molecular Biology, University of Southern Denmark |
| Relevance | Superseries |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 114 |
| Publications |
| PubMed | 2 |
| PMC | 2 |
| Other datasets |
| BioSample | 114 |
| GEO DataSets | 7 |
Comprehensive transcriptional profiling and mouse phenotyping reveals dispensable role for adipose tissue selective long noncoding RNA Gm15551. encompasses the following 6 sub-projects:
| Project Type | Number of Projects |
| Epigenomics | 1 |
BioProject
accession | Organism | Title |
|---|
| PRJNA825724 | Mus musculus | iBAT histone modification ChIP seq of wild type C57BL/6N mice exposed to cold and high fat diet. (Noncoding Kornfeld Lab -...) |
|
| Transcriptome or Gene expression | 5 |
BioProject
accession | Organism | Title |
|---|
| PRJNA825725 | Mus musculus | iBAT polyA RNA profiles of wild type C57BL/6N-ΔGm15551 mice exposed to cold. (Noncoding Kornfeld Lab -...) | | PRJNA825726 | Mus musculus | Adipose tissue poly RNA profiles of C57BL/6N-ΔGm15551 mice. (Noncoding Kornfeld Lab -...) | | PRJNA825727 | Mus musculus | Transcriptome profiles of differentiated wt1-SAM brown adipocytes treated with different sgRNA encoding plasmids and stimulated with isoproterenol (Noncoding Kornfeld Lab -...) | | PRJNA825728 | Mus musculus | transcriptome profiles of differentiated wt1-SAM brown adipocytes treated with different LNAs and stimulated with isoproterenol (Noncoding Kornfeld Lab -...) | | PRJNA825729 | Mus musculus | iBAT total RNA profiles of wild type C57BL/6N mice exposed to cold and high fat diet (Noncoding Kornfeld Lab -...) |
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