This project sequenced the genomes of three species of Pneumocystis that infect different hosts: P. jirovecii, which infects humans, P. murina, which infects mice, and P. carinii, which infects rats. While multiple samples were sequenced for each species, the best performing sample was moved forward to assembly and annotation (RU7, B123, and B80 respectively).
| Accession | PRJNA223519 |
| Type | Umbrella project |
| Submission | Registration date: 23-Oct-2013
Broad Institute |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 7702 |
| WGS master | 3 |
| Transcript | 7415 |
| SRA Experiments | 22 |
| Protein Sequences | 18437 |
| Other datasets |
| BioSample | 20 |
| Assembly | 3 |
This project encompasses the following 11 sub-projects:
| Project Type | Number of Projects |
| Genome sequencing |
5
5
10
|
|
| transcriptome | 1 |
BioProject
accession | Name | Title |
|---|
| PRJNA292577 | Pneumocystis | Pneumocystis murina and Pneumocystis carinii RNA-Seq transcriptome (Broad Institute) |
|