sediment metagenome (ID 483005) - BioProject

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Accession: PRJNA483005 ID: 483005

sediment metagenome

sediment metagenome Genome sequencing and assembly

The purpose of the present study was to compare the prokaryotic diversity of sapropel microbiomes in brackish lakes, and to infer novel information regarding their ecology, metabolism and the roles they have in biogeochemical cycling.

Accession	PRJNA483005
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	sediment metagenome[Taxonomy ID: 749907] unclassified sequences; metagenomes; ecological metagenomes; sediment metagenome
Grants	""ENLIGHTENING THE DARK: MICROBIAL DIVERSITY AND FUNCTIONALITY IN SAPROPELS FROM ROMANIAN SALT LAKES (EREBUS)"" (Grant ID PN-III-P4-ID-PCE-2016-0303, Romanian National Authority for Scientific Research)
Submission	Registration date: 29-Mar-2019 Babes-Bolyai University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	6061
WGS master	35
SRA Experiments	2
Protein Sequences	52597
Other datasets
BioSample	37
Assembly	35

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

35
35

Assembly	WGS	BioSample	Taxonomy
GCA_004524685.1	SDNT00000000	SAMN10768451	Candidatus Heimdallarchaeota archaeon
GCA_004524125.1	SDMW00000000	SAMN10768474	Candidatus Heimdallarchaeota archaeon
GCA_004524155.1	SDMY00000000	SAMN10768472	Candidatus Lokiarchaeota archaeon
GCA_004524515.1	SDNV00000000	SAMN10768449	Candidatus Lokiarchaeota archaeon
GCA_004524185.1	SDNB00000000	SAMN10768469	Candidatus Lokiarchaeota archaeon
GCA_004524165.1	SDMZ00000000	SAMN10768471	Candidatus Lokiarchaeota archaeon
GCA_004524365.1	SDNL00000000	SAMN10768459	Candidatus Lokiarchaeota archaeon
GCA_004524455.1	SDNR00000000	SAMN10768453	Candidatus Lokiarchaeota archaeon
GCA_004524265.1	SDNF00000000	SAMN10768465	Candidatus Lokiarchaeota archaeon
GCA_004524205.1	SDNC00000000	SAMN10768468	Candidatus Lokiarchaeota archaeon
GCA_004524535.1	SDNY00000000	SAMN10768446	Candidatus Lokiarchaeota archaeon
GCA_004524495.1	SDNS00000000	SAMN10768452	Candidatus Lokiarchaeota archaeon
GCA_004524385.1	SDNM00000000	SAMN10768458	Candidatus Lokiarchaeota archaeon
GCA_004524545.1	SDNX00000000	SAMN10768447	Candidatus Lokiarchaeota archaeon
GCA_004524615.1	SDMS00000000	SAMN10768478	Candidatus Lokiarchaeota archaeon
GCA_004524355.1	SDNK00000000	SAMN10768460	Candidatus Lokiarchaeota archaeon
GCA_004524325.1	SDNI00000000	SAMN10768462	Candidatus Lokiarchaeota archaeon
GCA_004524705.1	SDNU00000000	SAMN10768450	Candidatus Lokiarchaeota archaeon
GCA_004524645.1	SDNJ00000000	SAMN10768461	Candidatus Lokiarchaeota archaeon
GCA_004524725.1	SDNW00000000	SAMN10768448	Candidatus Lokiarchaeota archaeon
GCA_004524255.1	SDNE00000000	SAMN10768466	Candidatus Lokiarchaeota archaeon
GCA_004524425.1	SDNN00000000	SAMN10768457	Candidatus Lokiarchaeota archaeon
GCA_004524635.1	SDNA00000000	SAMN10768470	Candidatus Lokiarchaeota archaeon
GCA_004524075.1	SDMV00000000	SAMN10768475	Candidatus Lokiarchaeota archaeon
GCA_004524035.1	SDMT00000000	SAMN10768477	Candidatus Lokiarchaeota archaeon
GCA_004524055.1	SDMU00000000	SAMN10768476	Candidatus Thorarchaeota archaeon
GCA_004524435.1	SDNO00000000	SAMN10768456	Candidatus Thorarchaeota archaeon
GCA_004524595.1	SDOA00000000	SAMN10768444	Candidatus Thorarchaeota archaeon
GCA_004524285.1	SDNG00000000	SAMN10768464	Candidatus Thorarchaeota archaeon
GCA_004524445.1	SDNP00000000	SAMN10768455	Candidatus Thorarchaeota archaeon
GCA_004524305.1	SDNH00000000	SAMN10768463	Candidatus Thorarchaeota archaeon
GCA_004524145.1	SDMX00000000	SAMN10768473	Candidatus Thorarchaeota archaeon
GCA_004524665.1	SDNQ00000000	SAMN10768454	Candidatus Thorarchaeota archaeon
GCA_004524565.1	SDNZ00000000	SAMN10768445	Candidatus Thorarchaeota archaeon
GCA_004524225.1	SDND00000000	SAMN10768467	Candidatus Thorarchaeota archaeon

SRA Data Details

Parameter	Value
Data volume, Gbases	122
Data volume, Mbytes	53279

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sediment metagenome

sediment metagenome Genome sequencing and assembly

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