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Accession: PRJNA630780 ID: 630780

Clonal XDR-TB expansion of proto-Beijing M. tuberculosis

In Thailand, high prevalence of lineage 2-Beijing, particularly the modern sublineage associated with drug-resistant TB has been reported, but not lineage 2. More...
AccessionPRJNA630780
Data TypeRaw sequence reads
ScopeMultispecies
PublicationsSrilohasin P et al., "Genomic evidence supporting the clonal expansion of extensively drug-resistant tuberculosis bacteria belonging to a rare proto-Beijing genotype.", Emerg Microbes Infect, 2020 Dec;9(1):2632-2641
Grants
  • "The Newton UK-Thailand Research and Innovation Partnership Fund" (Grant ID P-18-50228, The medical research council, The Thailand research fund (TRF) and National science and technology development agency)
  • "Characterization of the transmission dynamics and microevolution of multidrug resistant Mycobacterium tuberculosis Beijing family in high TB burden setting" (Grant ID MU-PD_2014_03, Mahidol University)
  • "DNA chip for identification and typing Mycobacterium tuberculosis using DigiTag platform" (Grant ID P-12-01777, Japanese Science and Technology Agency/National Science and Technology Development Agency)
SubmissionRegistration date: 6-May-2020
- Mahidol University
- Drug Resistant Tuberculosis Research Fund, Siriraj Foundation
- Faculty of Medicine at Siriraj Hospital, Mahidol University
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments46
Publications
PubMed1
PMC1
Other datasets
BioSample43
SRA Data Details
ParameterValue
Data volume, Gbases39
Data volume, Mbytes17077

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