See
Genome Information for Mus musculus
Here, we use a microfluidics-based approach to prepare single-cell RNA-Seq libraries from over 1,700 primary mouse dendritic cells (DCs) stimulated with three pathogenic components and examine variation between individual cells exposed to the same stimulus and general strategies that multicellular populations use to establish complex dynamic responses.
Overall design: RNA seq libraries from 1775 single cells and population controls with SMARTer
| Accession | PRJNA212439; GEO: GSE48968 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus |
| Publications | Shalek AK et al., "Single-cell RNA-seq reveals dynamic paracrine control of cellular variation.", Nature, 2014 Jun 19;510(7505):363-9 |
| Submission | Registration date: 17-Jul-2013
Satija Lab, New York Genome Center |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 2425 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 2425 |
| GEO DataSets | 1 |