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Accession: PRJNA140081 ID: 140081

Glycine max (soybean)

Genome-Wide Transcript Profiling During Soybean Seed Development and Throughout the Soybean Life Cycle

See Genome Information for Glycine max
We report the genome-wide transcriptome of soybean seeds across several stages of seed development and the entire life cycle using Illumina high-throughput sequencing technology. More...
AccessionPRJNA140081; GEO: GSE29163
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismGlycine max[Taxonomy ID: 3847]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Glycine; Glycine subgen. Soja; Glycine max
Publications
  • Lin JY et al., "Similarity between soybean and Arabidopsis seed methylomes and loss of non-CG methylation does not affect seed development.", Proc Natl Acad Sci U S A, 2017 Nov 7;114(45):E9730-E9739
  • Danzer J et al., "Down-Regulating the Expression of 53 Soybean Transcription Factor Genes Uncovers a Role for SPEECHLESS in Initiating Stomatal Cell Lineages during Embryo Development.", Plant Physiol, 2015 Jul;168(3):1025-35
SubmissionRegistration date: 10-May-2011
Molecular, Cell and Developmental Biology, University of California, Los Angeles
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Publications
PubMed2
PMC2
Other datasets
BioSample12
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes4
SRA Data Details
ParameterValue
Data volume, Gbases54
Data volume, Mbytes36347

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