Escherichia coli (ID 251752) - BioProject

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Accession: PRJNA251752 ID: 251752

Escherichia coli

GenomeTrakr Project: Virginia - Division of Consolidated Lab. Services

See Genome Information for Escherichia coli

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This project is a component of the GenomeTrakr umbrella project for Escherichia coli and Shigella sp.

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52 additional projects are components of the GenomeTrakr umbrella project for Escherichia coli and Shigella sp..

8966 additional projects are related by organism.

Whole genome sequencing of cultured E.coli as part of the US Food and Drug Administration surveillance project for the rapid detection of food contamination events.

Accession	PRJNA251752
Data Type	Genome sequencing and assembly
Scope	Multiisolate
Organism	Escherichia coli[Taxonomy ID: 562] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli
Submission	Registration date: 1-Apr-2020 FDA/CFSAN
Related Resources	VA-DCLS website
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	45
SRA Experiments	45
Other datasets
BioSample	47
Assembly	45

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

45
45

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_025912755.1	ABJBVZ000000000	SAMN31456432	PNUSAE117859	Escherichia coli
GCA_023283285.1	ABGBMF000000000	SAMN28111064	PNUSAE100218	Escherichia coli
GCA_023283365.1	ABGBMJ000000000	SAMN28111066	PNUSAE100215	Escherichia coli
GCA_023283345.1	ABGBMI000000000	SAMN28111067	PNUSAE100214	Escherichia coli
GCA_023283325.1	ABGBMH000000000	SAMN28111065	PNUSAE100216	Escherichia coli
GCA_023288395.1	ABGBOC000000000	SAMN28093517	PNUSAE099976	Escherichia coli
GCA_023288385.1	ABGBOB000000000	SAMN28093518	PNUSAE099973	Escherichia coli
GCA_023283225.1	ABGBME000000000	SAMN28111063	PNUSAE100217	Escherichia coli
GCA_023324015.1	ABGDBS000000000	SAMN28159779	PNUSAE100290	Escherichia coli
GCA_024932305.1	ABHWUW000000000	SAMN30616095	PNUSAE100289	Escherichia coli
GCA_024932485.1	ABHWVM000000000	SAMN30616090	PNUSAE100701	Escherichia coli
GCA_025308195.1	ABIILG000000000	SAMN30855442	PNUSAE113785	Escherichia coli
GCA_011838925.1	AAQYPM000000000	SAMN13059383	PNUSAE036510	Escherichia coli
GCA_012209905.1	AARYZX000000000	SAMN08923886	VA-WGS-18017	Escherichia coli
GCA_012209885.1	AARYZW000000000	SAMN08923871	VA-WGS-18013	Escherichia coli
GCA_012209845.1	AARZAA000000000	SAMN08923889	VA-WGS-18021	Escherichia coli
GCA_012251465.1	AASBBG000000000	SAMN08923885	VA-WGS-18016	Escherichia coli
GCA_012251425.1	AASBBH000000000	SAMN08923888	VA-WGS-18019	Escherichia coli
GCA_012210085.1	AARYZY000000000	SAMN08923883	VA-WGS-18015	Escherichia coli
GCA_012209945.1	AARZAB000000000	SAMN08923887	VA-WGS-18018	Escherichia coli
GCA_012210045.1	AARYZV000000000	SAMN08923798	VA-WGS-18014	Escherichia coli
GCA_012209965.1	AARYZZ000000000	SAMN08923890	VA-WGS-18020	Escherichia coli
GCA_017740695.1	AAZTFU000000000	SAMN18266524	PNUSAE068702	Escherichia coli
GCA_017740655.1	AAZTFW000000000	SAMN18266517	PNUSAE068701	Escherichia coli
GCA_017740555.1	AAZTFJ000000000	SAMN18266521	PNUSAE068700	Escherichia coli
GCA_015334305.1	AAXEJV000000000	SAMN10485877	VA-WGS-18101	Escherichia coli
GCA_012331645.1	AASEYQ000000000	SAMN08234256	VA-WGS-17118	Escherichia coli
GCA_012331605.1	AASEYU000000000	SAMN08234255	VA-WGS-17117	Escherichia coli
GCA_012330665.1	AASEQQ000000000	SAMN11310202	VA-WGS-19016	Escherichia coli
GCA_012676605.1	AATACJ000000000	SAMN05242645	VA-WGS-16082	Escherichia coli
GCA_012704525.1	AATBUN000000000	SAMN04613925	VA-WGS-16077	Escherichia coli
GCA_012823775.1	AATIRF000000000	SAMN03431328	VA-WGS-00433	Escherichia coli
GCA_012923035.1	AATNFI000000000	SAMN14601454	PSU-2452	Escherichia coli
GCA_012915185.1	AATMUE000000000	SAMN14601442	PSU-2454	Escherichia coli
GCA_012915025.1	AATMUG000000000	SAMN14601453	PSU-2453	Escherichia coli
GCA_012925225.1	AATNIY000000000	SAMN14601452	PSU-2451	Escherichia coli
GCA_012902285.1	AATMEV000000000	SAMN14601447	PSU-2455	Escherichia coli
GCA_012830455.1	AATJEW000000000	SAMN02887162	VA-WGS-00284	Escherichia coli
GCA_012830425.1	AATJET000000000	SAMN02887164	VA-WGS-00286	Escherichia coli
GCA_012830355.1	AATJEX000000000	SAMN02887161	VA-WGS-00283	Escherichia coli
GCA_012830295.1	AATJER000000000	SAMN02887159	VA-WGS-00281	Escherichia coli
GCA_012830275.1	AATJEY000000000	SAMN02887160	VA-WGS-00282	Escherichia coli
GCA_012830195.1	AATJEV000000000	SAMN02887163	VA-WGS-00285	Escherichia coli
GCA_012922055.1	AATNED000000000	SAMN14601451	PSU-2495	Escherichia coli
GCA_012858655.1	AATKIJ000000000	SAMN14601448	PSU-2494	Escherichia coli

SRA Data Details

Parameter	Value
Data volume, Gbases	21
Data volume, Mbytes	13385

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Escherichia coli

GenomeTrakr Project: Virginia - Division of Consolidated Lab. Services

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