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Links from Nucleotide

Accession: PRJNA13184 ID: 13184

Pan troglodytes (chimpanzee)

The chimpanzee sequencing consortium used a whole genome shotgun method to sequence the chimp genome

See Genome Information for Pan troglodytes

A genome consortium sequenced the Pan troglodytes, chimpanzee, genome. The whole genome shotgun (WGS) sequencing has been completed to an assembled size of 3. More...

AccessionPRJNA13184
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismPan troglodytes[Taxonomy ID: 9598]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan; Pan troglodytes
Publications
  • Chimpanzee Sequencing and Analysis Consortium "Initial sequence of the chimpanzee genome and comparison with the human genome.", Nature, 2005 Sep 1;437(7055):69-87
  • Hughes JF et al., "Conservation of Y-linked genes during human evolution revealed by comparative sequencing in chimpanzee.", Nature, 2005 Sep 1;437(7055):100-3
SubmissionRegistration date: 16-Nov-2004
Chimpanzee Sequencing and Analysis Consortium
Locus Tag PrefixAGS46
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4345
WGS master2
Genomic DNA42
SRA Experiments4
Publications
PubMed2
Other datasets
BioSample5
Assembly2
Assembly details:
Assembly levelNumber of Assemblies
1
1
2
AssemblyLevelWGSChrsBioSampleIsolateTaxonomy
GCA_000325845.1ContigAADA00000000
SAMN02981217
Yerkes chimp pedigree #C0471 (Clint)
GCA_000001515.5ChromosomeAACZ00000000SAMN02981217
Yerkes chimp pedigree #C0471 (Clint)
SRA Data Details
ParameterValue
Data volume, Mbases94
Data volume, Mbytes81
Related RefSeq Project
PRJNA10627 : Reference genome sequence for Pan troglodytes

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